Paramormyrops kingsleyae: 111854823
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Entry
111854823 CDS
T05788
Name
(RefSeq) probable ATP-dependent RNA helicase ddx6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
pki
Paramormyrops kingsleyae
Pathway
pki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111854823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pki03019
]
111854823
03036 Chromosome and associated proteins [BR:
pki03036
]
111854823
Enzymes [BR:
pki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111854823
Messenger RNA biogenesis [BR:
pki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111854823
mRNA degradation factors
5'-3' decay
Decapping complex
111854823
Chromosome and associated proteins [BR:
pki03036
]
Eukaryotic type
Gene silencing
piRNA pathway
111854823
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
111854823
NCBI-ProteinID:
XP_023688989
Ensembl:
ENSPKIG00000024264
UniProt:
A0A3B3QS81
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
MATARTENPATVVMGLNKQNGQMRGQPKPAPVSSGPLAVGSQPGKTSSAPQKGASVPQSG
SGIKFGDDWKKCLQLPPKDLRVKTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQ
EESIPIALSGRDILARAKNGTGKSGAYLIPLLERVDLKKDYIQALVMVPTRELALQVSQI
SIQISKHLGGVKIMATTGGTNLRDDIMRLDETVHVVIATPGRILDLIKKGVAKVDRVQMM
VMDEADKLLSQDFVVLIEDIIGFLSKNRQILLYSATFPISVQKFMAKHLQKPYEINLMDE
LTLKGITQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFY
IHAKMMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIG
RSGRFGHLGLAINLITSEDRFNLKSIEDQLVTDIKPIPSSIDKSLYVAEFHSANPDREGE
EGAGEAGNKP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgcaagaacagaaaatccagccactgtggtcatgggattgaacaagcaaaac
gggcagatgagggggcagcccaaacctgcccctgtttcttcaggacccctagctgttggc
tctcagccagggaagacctccagtgcacctcagaaaggagctagtgtcccgcagtctggc
agtggcatcaagtttggtgatgattggaagaagtgcctgcagcttcccccgaaagacctg
cgtgttaaaacatctgatgtgacagcaacaaagggaaatgagtttgaggattactgtctg
aagcgggagctactgatgggcatctttgagatgggatgggagaagccttcccccattcag
gaggagagcattcccattgctttgtctggcagagacatactggcccgggccaaaaatggc
acgggcaagagtggcgcctacctcattcctctcctagagagggttgacctaaagaaagac
tacatacaggctctggtgatggtgcccacccgagagctggccctgcaagtcagccagatc
agcatccagattagcaagcacctgggaggggtcaaaatcatggccaccacagggggcacc
aaccttagggatgatatcatgaggctcgatgaaaccgttcatgtggtgatagccacccca
ggtaggatcctggacctgatcaagaagggggtggccaaagtggacagagtccagatgatg
gtgatggatgaggcggacaaattgctgtcgcaagattttgtggtactaatcgaggacatc
attggcttcttgtccaagaaccggcagatcctgctgtactctgcgacctttcccatcagt
gtccagaaattcatggcaaagcacctgcagaaaccctatgagattaacctgatggatgag
ctgactctgaagggcatcacccagtactatgcgtatgtgactgagaggcagaaagtgcac
tgtctcaacacactcttctccaggctgcaaataaaccagtccatcattttctgcaactcc
actcaaagagtggagctgctggccaagaagatcacccagctgggttactcctgcttctac
atccatgccaagatgatgcaggagtacaggaaccgtgtgttccatgacttcagaaatggg
ctgtgcaggaacctggtctgcacagatcttttcaccagaggaattgacatccaggctgtg
aatgttgtcatcaattttgacttcccaaaaaatgctgaaacttaccttcatcgtattggc
agatcagggagatttggtcacctgggcctcgccatcaacctgattacatccgaggaccgc
ttcaacctgaaaagtatcgaggaccagctagtgactgacatcaagcccattcccagcagc
atcgacaaaagcctctacgtggctgagttccactctgccaacccagaccgcgagggagag
gaaggggctggcgaggctggcaacaaaccctga
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