Paramormyrops kingsleyae: 111856957
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Entry
111856957 CDS
T05788
Symbol
cstf1
Name
(RefSeq) cleavage stimulation factor subunit 1
KO
K14406
cleavage stimulation factor subunit 1
Organism
pki
Paramormyrops kingsleyae
Pathway
pki03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111856957 (cstf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pki03019
]
111856957 (cstf1)
Messenger RNA biogenesis [BR:
pki03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
111856957 (cstf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
CSTF1_dimer
WD40_Gbeta
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_NWD2_C
Beta-prop_DCAF12
Ge1_WD40
Cytochrom_D1
Beta-prop_SPT8
DUF7099
Frtz
Motif
Other DBs
NCBI-GeneID:
111856957
NCBI-ProteinID:
XP_023693083
Ensembl:
ENSPKIG00000005323
UniProt:
A0A3B3RS17
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
MYRPKPTLRDRQHLYKLIISQLLYDGYTNIANNLINEVKPQSVVSPSEQLMQLAKMGMEN
DDSAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKHIQEAEMLRSISFHPSGDFLLVGTQHPT
LRLYDVNTFQCYVSSNPRDQHTDTISGVSYNSSANSYVTCSKDGSIKLWDGVSNRCVATF
DKAHDGAEVCSAVFSKNSKYILSSGKDSVAKLWEISTGRTLVKYTGAGLSGRQMHRTQAV
FNHTEDYVLLPDERTISLCCWDSRSAERKNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFR
ARFWYRRTTTD
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgccccaaacccacgctaagagaccgacagcatctgtacaagctgatcatcagc
cagcttctgtatgacggctacaccaacatcgcgaacaacctgattaacgaggtgaagccg
cagagcgtggtgtcgccgtctgagcagctcatgcagctcgccaagatggggatggagaac
gatgacagtgccgtgcagtatgccattgggcgctcggacacggtggcgccaggaactggt
attgatctggagttcgacgctgatgtccagaccatgtcgccggaggcttcggagtacgag
acctgctatgtgacatcgcacaaggggccgtgccgggtagccacgtacagccgggatggc
cagctcatagccacaggctccgccgacgcttccatcaagatcctggacacggagcgcatg
ctcgccaagagcgccatgcccattgaggtgatgatgaatgagactgcccagcagaacatg
gagaaccacccggtgatccggacactctacgatcacgtggatgaggtcacttgtctggcg
tttcatccgacagagcagatcctagcttcggggtcacgggattataccctcaaactgttt
gattactccaagccatctgcaaagagagctttcaagcacattcaggaagcagaaatgctg
cgttccatctccttccacccgtcgggggacttcctcctggtagggacgcagcacccgacc
ctgcggctctacgacgtcaacaccttccagtgctacgtgtcgtccaacccccgggaccag
cacacggacaccatctcgggcgtcagctacaactccagcgccaacagctacgtcacctgc
agcaaggacggcagcatcaagctgtgggacggcgtgtccaaccgctgcgtcgccacgttc
gataaggcccacgacggcgccgaggtctgctctgccgtgttctccaagaactccaaatac
atcctgtccagcggaaaagactcggtggcaaagctgtgggagatctctactggccgcacg
ctggtcaaatacacaggcgcgggtctgagcggccggcagatgcaccgtacgcaggcggtg
ttcaaccacacggaggactacgttctgctcccggacgagcgtaccatcagcctgtgctgc
tgggactcccgctccgccgagaggaagaacctgctgtctctgggtcacaacaacattgtg
cgctgcattgtgcactcgccgaccaaccccggctttatgacctgcagcgacgacttcagg
gctcgattctggtaccgacgcacaactacagactaa
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