Paramormyrops kingsleyae: 111857739
Help
Entry
111857739 CDS
T05788
Name
(RefSeq) transcription factor Sox-17-alpha-like
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
pki
Paramormyrops kingsleyae
Pathway
pki04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
111857739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pki03000
]
111857739
Transcription factors [BR:
pki03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
111857739
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
111857739
NCBI-ProteinID:
XP_023694641
Ensembl:
ENSPKIG00000010909
UniProt:
A0A3B3SHP1
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MSSPDAGYASDDQTQARCAMSMIIGHCQWTEPLSPMSEGKIKSEPGCGSQSRGKGEPRIR
RPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALPVSEKRPFVEEAERLRVQHM
QDHPNYKYRPRRRKQVKRVKRLDSGFLVHGVPDHAARGGADGRVCGDVVPGVNFHKHVGY
QVPAGGHYQHEVPAMGGHYEPYNLPTPDTSPLDAVEGDSIFFSQNSQEDCHSVYPYHPQA
PEYPPQDPHGGALLHRHLPPVEQASMATPGASLSGFPGCPNPLALYYSHCSPVHAKRPPG
QQAGQLSPPPDGHPPEAMEPIGQQELLGDVDRSEFEQYLNSSARQELSGLPFMAHDTNMA
ASDNLISSVLSDASTAVYYCNYNSV
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccccgatgctgggtatgcgagcgacgaccagacgcaggcacggtgcgccatg
tccatgatcatcggacactgtcagtggacggagcccctgagtcccatgagcgaggggaag
ataaagagcgagccgggctgcggcagccagagccgcgggaagggcgagccgcgcatccgg
cgccccatgaacgccttcatggtttgggcgaaggacgagcgcaagaggctggcgcagcag
aacccggacctgcacaacgcggaactcagcaaaatgctggggaaatcctggaaagcctta
cctgtgtcagagaagcgccccttcgtggaggaggccgagaggctgagggtgcagcacatg
caggaccaccccaactacaagtaccggccccgtcggaggaagcaggtcaagcgggtgaaa
cggctggactcgggcttcctggtgcacggcgtcccggaccatgcggcccgcggcggcgcc
gacggccgagtctgtggcgacgtcgtccctggcgtcaacttccacaagcatgtcggctac
caggtcccagcaggggggcactaccagcacgaggtcccggccatgggggggcactacgag
ccatacaacctgcccacgcccgacacctcacccctggatgctgtggagggcgactccatc
tttttttcccagaattcccaggaagactgccattctgtatacccataccacccacaagcc
ccagagtaccctccccaggatccacatgggggcgctcttctccacagacacctccccccc
gtggagcaggcgtccatggcgactccgggggcctccttatccggcttcccgggctgccca
aacccgctggccctctactactctcactgcagccctgttcatgccaagaggcccccggga
cagcaggccggacagttgtccccaccccccgacggtcacccccccgaggccatggagccc
attgggcagcaggaactcctcggagatgtggaccggagcgagttcgaacagtacctgaac
tcctccgcccggcaggagctgtccggcttgccgtttatggcccatgacaccaatatggcc
gcctcagacaacctcatctcctccgtcctctccgacgccagcacggcggtctattattgt
aattacaacagtgtgtaa
DBGET
integrated database retrieval system
