Paramormyrops kingsleyae: 111858349 Help Entry 111858349         CDS       T05788                                  Symbol col6a1 Name (RefSeq) collagen alpha-1(VI) chain   KO K06238   collagen type VI alpha Organism pki  Paramormyrops kingsleyae Pathway pki04510   Focal adhesion pki04512   ECM-receptor interaction pki04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:pki00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     111858349 (col6a1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     111858349 (col6a1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     111858349 (col6a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:pki04147]     111858349 (col6a1)    00536 Glycosaminoglycan binding proteins [BR:pki00536]     111858349 (col6a1) Exosome [BR:pki04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    111858349 (col6a1) Glycosaminoglycan binding proteins [BR:pki00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    111858349 (col6a1)  Hyaluronan   Extracellular matrix or blood plasma proteins    111858349 (col6a1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  VWA Collagen VWA_2 DUF1194 Motif Other DBs NCBI-GeneID:  111858349 NCBI-ProteinID:  XP_023695803 Ensembl:  ENSPKIG00000009956 LinkDB All DBs Position Unknown AA seq 1017 aa AA seqDB search MNTNKGRMLFSANFVLFWLFPLWAGSAAQDDLKRGGRDCPVDLYFVLDTSESIALRASHP DYYISQIKDFTVHFINGLKSIRQPCDRDLQWNAGVLHYSDEIEVIQELADVIQHRAEMTS KVNAISYFGKGTYTDCAMKEGISQLLSGGSTSHEMKYMIVVTDGHPTDGYKEPCGGLQDA ANEARQLGIKVFSVAIIPNEADKRLLTIATSQQYRQDFLAADTTEQNRRRVISSIMRMIT NDTEDACCTAECHAESGPPGPDGDIGLKGEIGRPGIPGEKGDIGSVGRTGDPGPAGYQGM KGDKGIKGIPGNRGFKGYKGHKGHHGLDGVDGLKGEAGLSGLPGCKGEQGGDGFPGELGP KGDPGPSGTRGPKGDPGEDGGPGRQGPSGQLGLKGNRGPKGQNGDKGERGDDGPSGRDGP RGEPGLVGENGEQGARGNRGPRGDPGDLGPRGEPGREGPSGGNGDPGEKGRPGAAGYRGD EGLPGTEGVRGPRGLKGSPGDRGVFGVKGEVGEVGNGTQGCPGFQGYPGPRGDPGEPGSK GTPGPKGDDGDPGDPGPDNNLPGNPGPKGAKGYRGPEGKPGQPGQEGHPGMDDCEILDII RKMCSCCECKCGPLSLIFVVDSSESIGRQNFLLSKRFIVAVLDRLVSDQQINFDGRESEV AVVQYSGDKAQEKLILGQSGITTLLAFKESVMNMKWLAQATFTGQALKVTLDDVVKLMKT KEVRAVVLTDGRSDISRDNIPLNVLCNSGVKVEGIGVQDNFGREQNPEQIQELSCPGNGN VDAGSDPITINNFEQLLQDGFLRNVTTKICSGKKCPTYKCEISFPGNTDILIMMDSSASV GSKNFGMTQEFVKRLAKQFLTSKTEHRVQVSVAQYSNNAVRVAPFSTNYAQVAEQIDLAH YLNEGTNIGEALDFSVETFKTRSVTRKKLLLLSNGRSPKITQANIKSKLGEVKRSGIEIF VLSAGDLVNEQLLRDLSTADQRDVASYHRHLFRVTDYPSLLKGVFHMTVSRRISLDK NT seq 3054 nt NT seq  +upstreamnt  +downstreamnt atgaacactaataaaggaaggatgcttttttctgcaaattttgttcttttctggcttttc cctttatgggcagggtcggcagctcaggatgatttaaagagaggggggagagattgccct gtggacctttattttgtcctggatacatctgaaagcattgcactgagggcttctcaccca gactactacatcagccagatcaaagacttcactgtacacttcatcaatgggctgaaaagc atccgccagccatgtgaccgtgacctgcagtggaacgccggggtgctgcactacagtgac gagattgaggtcatccaggagctggcagacgtgattcagcaccgagccgagatgaccagc aaagtcaacgccatctcttacttcggcaagggcacctacaccgactgtgccatgaaggag ggcatcagccagctgctcagcggaggctctaccagccacgagatgaagtacatgatcgtg gtgacagacggacaccccactgacgggtacaaagagccctgcgggggtctgcaggatgcc gctaatgaggctcgacagctgggcatcaaagtgttctccgtggccatcatccccaatgaa gcggacaagagattgttgacgatcgccacgagccaacagtacaggcaggatttcttggcc gcggacacgacggaacaaaaccggaggcgggtcatcagcagcatcatgaggatgattaca aatgacacagaggatgcgtgctgcactgccgaatgtcatgctgaaagtggtcctccaggg cctgatggagacattggactcaagggtgagattggcaggcctgggattccaggagaaaaa ggagacattggttctgtgggacgaacaggagacccaggaccggcaggttaccaggggatg aagggtgacaaaggaatcaagggtatcccgggaaatcggggtttcaaaggatacaaggga cacaaaggacaccatggtctcgatggtgtagatgggcttaagggtgaagctggattatcg gggttgccgggctgcaaaggagagcaaggcggtgatggatttccaggagaactaggtcca aaaggagaccctgggccatctggtaccagaggaccaaaaggagatccaggagaggatggg gggccaggaaggcaaggccccagtggccagcttggccttaagggcaacaggggaccgaag ggccaaaacggagacaagggagagagaggagatgatggaccctcgggccgggatggaccc cgtggggaaccgggtctagtaggagagaatggcgagcagggagcccgcggcaatcggggg ccccgtggagaccccggcgatttaggacctcgtggtgaaccgggtcgggagggtccttct ggtggtaatggagatccgggtgaaaagggccgccctggtgccgcgggatacagaggagat gaaggcctgcccggaactgagggagtaagggggccacgggggcttaaagggtctccaggt gacaggggggtgtttggcgtaaagggtgaagtaggagaagtaggaaatggcactcagggc tgccctggcttccagggttaccctggccccagaggagacccaggagagccgggatctaaa ggaaccccaggacctaaaggagatgacggagatccaggtgaccctgggccagataataac ttgcccggaaatcctggacctaaaggagcaaaagggtacagaggaccggaagggaagcct ggccaacctgggcaagagggacatcccggaatggatgactgtgaaattttggatattatc aggaagatgtgttcttgctgtgagtgcaagtgtggcccgctgagtctcatcttcgtggtg gacagctcagagagcatcggccgccaaaatttcctcctttccaagaggttcatcgtggcg gtccttgatcgactggtgtcagaccaacaaatcaatttcgacggcagggagtccgaagtg gctgtggtgcagtacagtggagacaaggcccaggagaagttgattctcggccaatccggc atcactaccctcttggcatttaaagaatcggtgatgaatatgaagtggctggctcaggcc acattcactgggcaggccctgaaagtcaccctggatgatgtcgtcaagctgatgaagacg aaagaagtccgggctgtggtcctgactgatggccgctcggatattagcagggataacatc ccgcttaatgttctgtgcaacagcggcgtcaaggtggaggggattggtgttcaggataac ttcgggagggagcagaacccagagcagattcaggagctgtcgtgtcctggaaacgggaac gtggacgccggcagtgatcccatcacgatcaataacttcgaacaactgcttcaggatggg ttcttgcgcaatgtgacgacaaagatatgttcaggaaagaagtgcccgacatacaaatgt gaaatttctttcccgggaaacaccgacatcttgataatgatggacagctctgccagtgtg gggtccaaaaactttgggatgacccaggaatttgtgaagaggctcgcgaagcaattcctc acatcgaagaccgagcatcgggtccaggtgtccgtggctcagtacagcaacaatgctgtg cgggtggcccccttctccacaaactacgcacaggtggccgaacagatcgacttggcccat tacctaaacgagggcacgaatatcggggaagcccttgacttctctgtcgagacgttcaaa acccgcagcgtaactagaaagaagctactgctgctgtccaacggacgatccccgaagatc acacaggccaacatcaagagcaagcttggggaagtgaagaggtcgggcattgagatattc gtgctgtctgctggcgatctggtgaacgagcaactcctgcgtgacctgtccacagcagac cagcgggacgtcgcctcctatcaccgacatctcttcagagtcaccgactacccgtcctta ctaaagggtgtctttcacatgactgtctctaggaggatttccctggataaatag

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