Paramormyrops kingsleyae: 111858845
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Entry
111858845 CDS
T05788
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pki
Paramormyrops kingsleyae
Pathway
pki03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111858845 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pki03021
]
111858845 (taf5)
03036 Chromosome and associated proteins [BR:
pki03036
]
111858845 (taf5)
Transcription machinery [BR:
pki03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111858845 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
111858845 (taf5)
Chromosome and associated proteins [BR:
pki03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
111858845 (taf5)
STAGA complex
111858845 (taf5)
TFTC complex
111858845 (taf5)
SAGA complex
111858845 (taf5)
SLIK complex
111858845 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR75_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_Nup120_160
PEP5_VPS11_N
eIF2A
VPS8_N
Beta-prop_WDR35_TULP_N
CDK5RAP3
Motif
Other DBs
NCBI-GeneID:
111858845
NCBI-ProteinID:
XP_023696747
Ensembl:
ENSPKIG00000002076
UniProt:
A0A3B3RAD0
LinkDB
All DBs
Position
Unknown
AA seq
755 aa
AA seq
DB search
MAAVQDGQIEPESEKEIKSETLNDATGNHAAAVGGLLPSSPVSTASVGASNSSKAAASED
QQTLLAVLQFLKRNKLVESADILRREAGLLEESDDAQGSEGGRDELGGASADEGGEAASL
FSRVTSATGASGIATGPAPSKATVAQGSEDQPDVSVVLSAYSQQGDPALYQMYYSGLKKF
IESVLDCHRAELSQLFYPLFVHMYLELVYNNHEQEAKEFFEKFHGDQECYYRDDLRVLSG
MSKKEHMRGNETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDG
MPRSKSQIDSMSGSLAGEAKREANKAKVFYGLLKEPEIEVPLDDEDEEAENEEGKPKKKK
PKKDSMGSKSKKQDPNAPQQNRIPLPELKDSDKLDKIMYMKEATKRIRLGPDNLPSICFY
TFLNAYQGLTAVDITDDSSLIAGGFADSTVRVWSVTPRKLRAVKSATDLSLIDKESEDVL
ERIMDEKTASESKILYGHNGPVYGISFSPDRNYLLSCSEDGTVRLWSLQTFTCLVCYKGH
NYPVWDVQFSPHGYYFTSGGHDRVARLWATDHYQPLRMFAGHLADITCTRFHPNSNYLAT
GSADRTVRLWDILNGNCNRIFTGHKGPIHSLAFSPNGKFLASGATDGRVLLWDIGRGLMI
EELNGHTDTIYALKFSRDGEILASGSMDNTVRLWDAVKAFDDIETDDFTAATGHVHLSEN
SLELQLGTYTSKSTPVIHLHFTRRNLLLAAGGYNP
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgttcaggatggtcagatcgaaccggagagcgaaaaggaaattaaatcggaa
acgttgaacgatgcgacgggaaaccatgcagctgcagtcggggggctgcttccctcctct
ccggtttcgactgcgtccgttggggcctcaaactcctcgaaagcggcggcgtcggaggac
cagcagactctcctggccgtgctgcagttcctcaagaggaacaagctggtggaatcggcc
gatatcctgcgccgagaggccggcttgctggaggagtcggatgacgcgcagggctccgag
ggcggccgggatgagttagggggggcgagtgcggatgaaggcggggaggcagcgtcgctt
ttcagccgagtgacaagcgccacgggagcctctggtatcgcaacaggtccggcgcctagt
aaagctacagtagcccaaggaagcgaggaccaaccagatgtcagtgtggtactttctgcc
tacagccagcagggggacccagcactgtaccagatgtactacagtggactcaagaagttt
attgagtcggttcttgactgtcacagagctgaactgtcacagctattttacccactgttt
gtccacatgtacctggagctcgtgtacaacaaccatgaacaagaagcaaaggaattcttt
gaaaaattccatggagaccaggagtgttactatcgggatgatctgcgggtgctgtccggg
atgtccaagaaggagcacatgagaggcaacgagacgctcctcgacttccgtaccagcaag
ttcgtgctgcgcatctcccgggactcgtaccagctgctcaagaggcacctgcaggagcgc
cagaacaaccagatctggaacatcatccaggagcacctctacatcgacatcttcgacggc
atgccacgcagcaagagccagatcgacagcatgtcggggagtctggcgggggaggccaag
cgggaagccaacaaggccaaggtgttctacggactcctgaaggaaccggagatcgaggtg
cccctagatgatgaggacgaggaggcggagaacgaggaggggaagcccaagaagaagaaa
ccgaaaaaggacagcatgggctcgaagagcaagaagcaggatcccaatgcgccccagcag
aacaggattcctcttcctgagctgaaggattctgacaagctggataaaatcatgtatatg
aaggaggccaccaagcgtatccgactgggcccagacaacctgccatcaatctgcttctac
acctttctcaacgcctaccagggtctgaccgctgtggatatcacggacgactccagcctg
atcgccggcggcttcgcggactccaccgtacgagtgtggagcgtcactcccaggaagctg
cgtgcggtcaaatccgcaacagacttgagtttgatcgataaggagtcggaagacgtcctg
gaaagaatcatggatgaaaagacagcgagcgaatccaagatcttgtacggacacaacggt
ccggtgtatggaattagcttcagcccggataggaactatctgctgtcctgctcggaggat
ggtactgtgaggctgtggagcctgcagaccttcacctgcctggtgtgctacaagggacac
aactaccccgtgtgggatgtgcagttctccccgcatggctactacttcacgtccgggggc
cacgaccgtgttgctcggctctgggccacggatcactaccagcctctgcgcatgttcgcg
ggccacctggccgacatcacctgtacccgcttccatcccaactccaactacttggccacg
gggtcagctgaccgcaccgtcaggctctgggacatcctgaacggcaactgcaatcgcatc
ttcacggggcacaagggacctatccactcgctggccttctcccccaacgggaaattcctg
gcgtcgggggccactgacggccgggttctcctatgggacatcggccgggggctgatgatc
gaggagctcaatggtcacacggacacaatctacgccctcaagttcagtcgagatggagag
atactggcttcaggctccatggacaacacggtccgcctctgggacgcggtgaaggccttc
gacgacatcgagacggacgacttcaccgccgccaccggtcacgtgcacctgtcggagaat
tccctggagctgcagctggggacctacacgtccaaatccacacccgtcatccacctgcac
ttcactcgccggaacctgctgctggcggctggggggtataacccatag
DBGET
integrated database retrieval system
