Paramormyrops kingsleyae: 111859640
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Entry
111859640 CDS
T05788
Name
(RefSeq) collagen alpha-1(XVII) chain-like isoform X1
KO
K07603
collagen type XVII alpha
Organism
pki
Paramormyrops kingsleyae
Pathway
pki04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111859640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
111859640
NCBI-ProteinID:
XP_023698259
Ensembl:
ENSPKIG00000001737
LinkDB
All DBs
Position
Unknown
AA seq
1466 aa
AA seq
DB search
MDSLTRYRHTSGGRSESLGKVVTENITKSTTLASLPPSGGGGSQVRSGRSGSSTSGGLRR
GQGSSPIFMERKTITSRSAGYDGSSSGNSSPEYPRKDYGTASGGICSRGRSQTRESEIRA
RLQSASPSTRWTELDEVKKLLKGSRSCSVSPTRSPSSTLPIPRKASVETRIISEPSQSVC
GFPNNLGTASTSFLSSSGVNVGTSTGANAGVTPHSVSGQYESTVLGSTSPSYLWTSSTLP
SGGFQTNTKNLSPTTSPSLLPGFGVQNNLTLSSIPGNSCSTVCGFPNNLGTASTSVLSSA
GVNVGTSTGANAGVTPYSGNTVKLHNDDTLLKDYKFLLLEKENIPAKKDKELLVMSKNSG
KQFRERLRDSTCSEDSVQKEKEVSIAKPAFLQYSQDSYGPLKASTKDKATYAEIHKGGDS
TKAGAGFCGGGSCCSWWKWLLGLLLGLLLLLGLLFGLIALAEEVKNLKKRVTNLEERPHS
GRMLGLEMSGVPNMDQGNLQQTVQQLMRSELQSESFRAAFASSMRGEKGEPGLRGDTGYP
GPKGDTGLPGVPGSPGPKGDIGHDGTKGQKGSQGDHGTEGSPGPRGREGPAGPRGEAGPP
GTGEKGDRGSSGVPGLPGLVGPPGPVGPKGFAGTPGAPGVHGEPGAQGFRGESGPSGAKG
ERGVQGSQGPKGDQGEKGPRGPSGDPGLPGLPGIAGEKGPKGSAGLPGADGEKGPRGDQG
PIGLPGIRGPPGSQGDAGSSGSPGLQGPPGIPGNPGAPGTKGDPGEPGRIINAAGSNSVG
IPGPPGNPGPPGPPGPSGLSGPIGPAGLPGSPGPKGAKGDQGQYAESNAVLSSLPGPPGP
PGPPGMPGPAGRAGDSRQGPPGPPGPPGSPGYGQPGPPGQKGEPGSLLPSSGTFYAGPPG
PPGQPGQKGAQGIQGPRGYQGEPGQPGLPGSSGSLGDHGRGLAGPSGPMGPPGASGPPGP
PGREGPKGEAGVPGAPGIPGASRGGNSRISQGLPGPPGPPGTPGRPSDGSSKEELRQYIL
EYMQSDALRKYLIGPQGLPGPPGASALGAYSVEDLASRVVAYIQRTGAVIGAPGPAGPPG
SVSVSDIIALMQRDEVRQYLIGPAGPPGPPGVLQTSLNMQEVATRILGTMNERGMVGVPG
PPGPPGPPGPVSSHLPSLERVEYVSQPGPPGRPGLPGPPGPPGLASGGSHSSGYRLEDIK
QYLQDSGFNGPPGAPGPPGPMGPQGPPGDSRGLVSYTGNSQQEWVHAYLQQYFSNESVRR
SITGPPGPPGPRGEKGERGDSSYILGTTHERSHGQSSDHAYGQNGERGYHLDERRQGQNG
NTGYGYNERRLETADYSNMALKVAEYIKSQGLLRGLIPDGHGLERWDVQGPPGPPGPRGA
PGYSRIIGYHGNVTADLMDFFRTHGAIVGPAGIPGPQGERGYPGLKGDRGEVGSPGQPGR
DGPRGEKGEKGEPMVVGRRKRRSLGV
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atggacagtttgacaaggtacagacacacttcgggtgggagatcggaatctctaggcaaa
gttgtgacagaaaatatcaccaagagtacaacactggcatcgttgcctcccagtggaggt
ggagggagtcaggttaggagtggcaggtcaggctcttccacatctggaggcctgaggagg
ggacagggctcttccccaatcttcatggaaagaaagaccataaccagtcgctcggcggga
tacgacggaagttccagtggaaactcttctcctgaatacccaaggaaggactatggtact
gcgtcaggaggcatctgcagcagagggaggagccagacaagagagagtgagatccgagct
cggctgcaaagtgcttccccttcaactcgatggacggagctggacgaggtgaagaagctg
ctgaagggcagcaggtcttgcagcgtgagccccaccaggtccccctccagcaccctgccc
atccccaggaaggccagtgtggagaccaggattatttcagagccctcccagtcagtctgt
ggttttccgaataacctgggtactgcttccaccagctttctgagcagttcaggtgtcaac
gtgggaacgagcactggagccaacgccggggtcaccccccattccgtttcagggcagtat
gagagcacagttctaggttctacatctccatcctacttgtggaccagttccactctccca
tcaggtggcttccaaaccaacaccaagaacctgtcccccaccacctcaccctccttgctg
ccaggctttggggtccagaacaatctcaccctcagctccataccagggaacagctgcagt
acagtctgtggttttccgaataacctgggtactgcttccaccagcgttctgagcagtgca
ggtgtcaacgtgggaacgagtacaggagccaatgctggggtcaccccctattccgggaat
acagtcaagctgcataatgacgacacgctccttaaagactataagttcctgttgctggag
aaggagaacattccagccaagaaggacaaagaacttctcgtcatgagcaaaaacagcggc
aagcagttcagagaaagattaagagacagcacttgttcagaagactccgtacagaaagag
aaggaggtatccattgcaaagcctgcatttttgcagtacagccaggacagctatgggccc
ttaaaggcttctacgaaggacaaagccacatatgcagagatccataaagggggggactcc
acaaaggcaggagcaggcttctgtgggggcggctcctgctgcagctggtggaagtggttg
ctgggattgctacttggcctgctgcttctgttgggtctgctctttggacttattgccctc
gcggaggaggtgaagaacctgaagaaacgcgttacaaacctggaggaaagaccccacagc
ggtcgaatgttaggcttggaaatgagcggtgtacctaatatggaccaaggcaacctccag
caaactgtgcagcagctaatgaggtccgagctacaatcagaatcattcagagctgctttt
gcatcctccatgaggggagaaaaaggagaaccaggtctcagaggtgatacaggatatccg
ggacctaaaggtgacacaggtttgccaggagtgccaggttcacctgggcccaaaggtgat
attggacacgacggaaccaaaggtcagaaaggaagtcaaggggaccatggaacagaaggc
tcacctgggccccggggacgagaggggcctgcggggccacgtggggaggccgggcctcct
ggaactggagaaaaaggggacagaggttcttctggtgttcctgggcttccggggcttgtt
gggccaccgggtccagtgggacccaaaggctttgcaggtacgcctggcgcccccggtgtt
cacggagaacctggcgctcaaggcttccgtggagaaagtggaccatctggagctaaaggg
gagcgaggggtacaagggagtcaaggacccaagggtgaccagggagagaaaggaccacgt
ggaccttcaggtgatccaggactgccaggacttccaggcattgctggtgagaagggacct
aaaggatctgcaggtcttcctggagctgatggagaaaagggccccagaggtgaccagggt
ccgatcggactgccaggaatcagaggcccaccaggatctcaaggcgacgctggtagttca
ggatctcctggactacaaggaccaccaggaattccaggaaatccaggtgcgcctgggacc
aaaggtgatccaggtgaacctggaagaatcatcaatgcagcgggttcgaattctgtgggc
atacctggtcccccaggcaaccctgggccgcctggacctccaggaccatcaggactgtca
ggtccaattggtccagctgggctgcctggttcacctggtcctaagggtgccaaaggagat
caaggacaatatgctgaaagcaatgcagttctgtcaagcctcccaggccctcctggacca
ccagggccgccggggatgccagggccggctggccgtgcaggagactccagacaaggtcca
ccagggccccctggtccacctggaagtccaggatacggccagccaggccccccaggacag
aaaggagaacctggaagcctcttgccaagctcaggaacattctatgctggacctccagga
cccccgggacaacctggacagaaaggagcgcaaggtattcagggtccaagaggatatcag
ggtgaaccaggccaaccaggcctgcctggatcatcaggaagccttggagatcatgggaga
ggtcttgctggcccctcaggacctatgggcccccctggtgcctcagggccacctggaccc
ccagggagagagggaccaaaaggtgaagctggagtaccaggcgccccgggtatacctggt
gcttccagaggtggtaactcaagaatcagccaagggctacctggcccccccggccctcct
gggaccccaggtcggccaagtgatgggtcatcgaaggaagaacttcgccagtacattttg
gagtacatgcagagtgatgccctcaggaagtaccttattgggccccagggtctccccgga
cctcctggtgccagtgctttgggagcttattctgtggaggacttggcctcccgagtggtt
gcctacatccagcgtacgggagctgtgattggagctccaggtccagctggtccccctggg
tctgtgtctgtcagtgacatcatcgcactgatgcagcgggatgaagtgcgacagtatctg
attggtccagctggtcctcctggaccaccaggagttcttcagacctcactaaatatgcag
gaggtggctactcgaatccttggaaccatgaatgaacgtgggatggttggagttcctgga
ccccctggccctcctggacctcctgggccggtatcttctcacctgccctcattagaaaga
gtggagtacgtgtcacagccagggcctccaggtcgacctggacttccagggcctcctgga
cctccaggcctggccagtggtggatcccatagctctggctatagactcgaggatatcaaa
cagtacttgcaggattctggatttaatggaccaccaggagcccctggccccccagggcca
atgggccctcaggggcctcctggggactccagaggactggtgtcatacactggaaactct
cagcaggaatgggtgcatgcctatttacagcagtatttcagcaatgagagtgtccgtcgc
tccatcacaggcccacctggccctcctggtcctcggggagagaagggggaacgcggggat
agcagctacatcctggggactacccacgagcgcagccacggtcagagtagcgaccacgca
tacggtcaaaatggtgagcgcgggtaccatctagatgaacgaagacagggccagaatggc
aacacaggatacggctacaatgaaaggcggctggaaacagcggactactcaaatatggct
ttgaaagtggccgagtatatcaagagccagggtctactgcggggcctgattccagacggt
catgggctggagcgatgggatgtccagggtccccccggcccccccggcccacgtggcgct
ccaggatatagccgcatcattgggtaccatggcaacgtgacggctgatctcatggacttc
ttcagaacacatggagccattgttggcccagccggcatacctggaccacagggggagaga
gggtatcctggactgaaaggtgacagaggtgaagtgggatctccggggcaaccaggccgt
gatggccccaggggagagaagggcgaaaagggagagccaatggtggttgggcgtcggaag
aggaggagcttgggggtgtga
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integrated database retrieval system
