Paramormyrops kingsleyae: 111860164
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Entry
111860164 CDS
T05788
Symbol
lsm4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
pki
Paramormyrops kingsleyae
Pathway
pki03018
RNA degradation
pki03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111860164 (lsm4)
09123 Folding, sorting and degradation
03018 RNA degradation
111860164 (lsm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pki03019
]
111860164 (lsm4)
03041 Spliceosome [BR:
pki03041
]
111860164 (lsm4)
Messenger RNA biogenesis [BR:
pki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111860164 (lsm4)
mRNA degradation factors
5'-3' decay
Lsm complex
111860164 (lsm4)
Spliceosome [BR:
pki03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
111860164 (lsm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
111860164
NCBI-ProteinID:
XP_023699349
Ensembl:
ENSPKIG00000006154
LinkDB
All DBs
Position
Unknown
AA seq
141 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGMQQNKMQQKGRGGGAGRGVFGGRGRGMP
GAGRGQQEKKPGKPQGVKNQH
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccctgtcattgttgaagactgcacagaatcacccaatgctggtggagttgaag
aatggagagacctacaacggccatctggtcagctgtgacaactggatgaacatcaacctg
cgagaagtcatctgcacatccagggatggagataagttttggaggatgccagaatgctac
atccgaggcagcaccattaagtatctacgcatccctgacgagatcattgacatggtgaag
gaggaggtggtgtccaagggtcgtgggcgaggcggcatgcagcagaacaagatgcagcag
aaaggaagaggcggcggtgctggcagaggtgtgtttggtggtcggggcagaggcatgccc
ggggctgggcgcggacaacaagagaagaagcctggtaaacctcagggggtcaagaaccag
cactga
DBGET
integrated database retrieval system
