Pseudomonas kielensis: Q1W70_02955
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Entry
Q1W70_02955 CDS
T09328
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
pkj
Pseudomonas kielensis
Pathway
pkj02020
Two-component system
pkj02025
Biofilm formation - Pseudomonas aeruginosa
pkj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pkj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Q1W70_02955
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
Q1W70_02955
09142 Cell motility
02040 Flagellar assembly
Q1W70_02955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkj03000
]
Q1W70_02955
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pkj02035
]
Q1W70_02955
Transcription factors [BR:
pkj03000
]
Prokaryotic type
Helix-turn-helix
Other families
Q1W70_02955
Bacterial motility proteins [BR:
pkj02035
]
Flagellar system
Flagellar assembly proteins
Others
Q1W70_02955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_7
nSTAND3
AAA_22
AAA
bpMoxR
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WKL53559
LinkDB
All DBs
Position
complement(568155..569630)
Genome browser
AA seq
491 aa
AA seq
DB search
MWRETKILLIDDDSVRRRDLAVILNFLGEENLPCASYDWQQAVGSLSSSREVICVLIGTV
NAPGSLSALLKTLATWDEFLPVLLMGDNCAQDLPDDQRRRVLSTLEMPPSYSKLLDSLHR
AQVYREMYDQARERGRHREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRRDAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSVDVRIIAATHKNLESMIEVGSFR
EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSAAIMSLCRHGWPG
NVRELANLVERMAIMHPYGVIGVVELPKKFRYVDDEDEQLVDSLRSDLEERVAINGHAPD
FNANALLPPEGLDLKDYLGGLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKYGM
SRREGDEQADD
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaaaattctgctgattgatgacgatagcgtccgccgccgcgacctg
gcggtgattttaaattttctcggtgaagaaaacttaccctgcgcaagctatgactggcag
caggctgtcggctctttgtcgtctagtcgtgaagtcatctgtgtcctgatcgggacggtc
aatgcacctggttcgttgtcggctctgttaaagacactcgcaacctgggatgagttcctt
cctgttttgctgatgggcgataattgtgcccaggacttgcccgacgaccagcgtcgtcgg
gtgttgtcgaccctggaaatgcctcccagctacagcaagttgcttgattcgctgcaccgc
gcccaggtctatcgcgagatgtacgaccaggcccgcgaacgcggtcgccatcgtgaaccc
aacctgtttcgcagcctcgtcggcaccagccgggcgatccagcacgtgcgtcagatgatg
cagcaagtggccgacaccgacgccagcgtgctgatcctcggcgagtcgggcaccggcaag
gaagtggtcgcgcgcaacctgcactatcactccaagcgccgtgacgcaccgttcgtgccg
gtcaactgtggcgcgatcccggccgagttgctggaaagcgaattgttcggccacgagaag
ggcgcctttaccggggcgatcaccagccgtgccgggcgttttgagctggccaacggcggt
accctgttcctcgacgagatcggcgacatgccgctgccgatgcaggtcaagctgctgcgg
gtattgcaggagcgcaccttcgaacgcgtgggcagcaacaagacccagagcgtcgacgtg
cggatcattgccgcgacccacaagaacctcgaaagcatgatcgaggtcggcagcttccgc
gaagacctgtactaccgcttgaacgtcttcccgatcgaaatggcccccctgcgtgagcgg
gtcgaagacatcccgttgctgatgaacgagttgatctcgcgcatggagcacgaaaaacgc
ggctcgatccgcttcaactcggcggcgatcatgtcgctgtgtcgccacggctggccgggc
aacgtccgcgagctggccaacctggtggagcgcatggcgatcatgcacccgtacggggtg
atcggcgtggtcgagttgccgaagaaattccgctacgtcgacgacgaagacgagcagttg
gtcgacagcctgcgcagtgaccttgaagagcgggtggccatcaacggccatgccccggac
ttcaacgccaatgccttgctgccacctgaaggcctggacctcaaggactacctcggtggc
ctggagcagggcttgatccagcaggccctggacgatgccaatggcatcgtcgcccgtgcg
gccgaacgcctgcgcatccgccgcaccaccctggtggagaagatgcgcaagtacggcatg
agtcggcgggaaggggacgaacaggcggacgattga
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