Pseudomonas kielensis: Q1W70_06285
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Entry
Q1W70_06285 CDS
T09328
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pkj
Pseudomonas kielensis
Pathway
pkj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pkj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q1W70_06285 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkj03019
]
Q1W70_06285 (pnp)
03016 Transfer RNA biogenesis [BR:
pkj03016
]
Q1W70_06285 (pnp)
Enzymes [BR:
pkj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Q1W70_06285 (pnp)
Messenger RNA biogenesis [BR:
pkj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Q1W70_06285 (pnp)
Transfer RNA biogenesis [BR:
pkj03016
]
Prokaryotic type
tRNA degradation factors
Q1W70_06285 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
S1_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
WKL54182
LinkDB
All DBs
Position
complement(1279956..1282061)
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQQKASSLDMVV
AGTSEAVLMVESEAKELTEDQMLGAVLFAHDEFQVVINAVKELAAEAAKPTWTWAPQPEA
TALLGAIRAEFGEAISQAYTITIKADRYARLGELKDQVVAKLSGEEGQPTSAEVKAAFGE
IEYRTVRENIVNGKPRIDGRDTKTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSIAAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRTELSENAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaaaaaattccagttcggtcagtcgaccgttaccctcgagactggc
cgtatcgcccgtcaggcctccggcgcagtattggtcaccgttgacgacgacgtcagcgta
ttggtgaccgtggttggcgccaagcaagccgatccaggcaaaggcttcttccctctgtct
gttcactaccaggaaaagacttacgctgccggtaagatccctggcggtttcttcaagcgt
gaaggccgtccttccgagaaagaaaccctgacttcccgactgatcgaccgtccgatccgt
ccgctgttcccagaaggcttcatgaacgaagtgcaggttgtctgcaccgtcgtttccacc
agcaagaagaccgatccggacatcgctgcgatgatcggtacttcggccgccctggccatc
tccggcattcctttcgatggcccgatcggcgctgcccgcgttgcgttccacgaaagcacc
ggctacctgctgaacccgacttacgaacaacagaaagcttcgagcctggacatggtcgtt
gccggtacttcggaagcggtattgatggttgaatcggaagccaaagagctgaccgaagac
cagatgctgggcgcggtactgtttgctcacgacgagttccaggtggtgatcaacgccgtc
aaggaactggccgccgaagccgccaaaccgacctggacctgggctccacagcctgaagcc
accgcacttctgggcgctatccgtgccgagttcggtgaagccatctcccaggcctacacc
atcaccatcaaggccgaccgttacgctcgcctgggcgaactgaaagaccaggtcgtcgcc
aagctgtccggtgaagaaggccaaccgacttccgctgaagtcaaagccgctttcggcgaa
atcgaataccgcaccgttcgcgaaaacatcgtcaacggcaagccacgtatcgatggtcgc
gacaccaagaccgtacgtccgctgaacatcgaagtcggcgttctgccaaagacccacggt
tcggcactgttcacccgtggcgaaacccaggccctggtcgttgcaacgctgggcaccgcc
cgtgacgcacaactgctggacaccctggaaggcgagaaaaaagacccgttcatgctgcac
tacaacttccctccgttctcggtaggtgagtgtggtcgcatgggtggcgctggtcgtcgc
gaaatcggtcacggccgcctggcccgtcgttcgatcgccgccatgctgcctgctgccgac
gtgttcccgtacaccatccgcgtggtatcggaaatcaccgaatccaacggttccagctcc
atggcttccgtttgcggcgcttccctggccctgatggacgctggtgtgccaatgaaggcg
ccggttgccggtatcgccatgggtctggttaaagaaggcgagaagttcgccgtcctgacc
gacatcctgggtgacgaagaccacctgggcgacatggacttcaaggtagccggtaccgcc
aaaggtgtgaccgcgctgcagatggacatcaagatcaagggcatcaccgaagaaatcatg
gagatcgctctgggccaagccctggaagcgcgcctgaacatcctcggtcagatgaaccag
atcattggtcagtcccgcactgaactgtcggaaaatgctccgaccatgatcgcgatgaaa
atcgacaccgacaaaatccgtgatgtcatcggtaaaggcggcgcgaccattcgtgcgatc
tgtgaagaaaccaaggcttcgatcgacatcgaagacgacggttcgatcaagatcttcggc
gaaaccaaggaagcggctgaagctgctcgtcagcgcgtcctgggcatcaccgcagaagcc
gagatcggcaagatctacgtgggcaaggttgagcgcatcgtcgacttcggcgcattcgtc
aacatcctgccaggcaaggacggtctggttcacatctcgatgctgagcgacgctcgcgta
gagaaagtgaccgacatcctcaaagaaggccaggaagtggaagtactggtactggacgtg
gacaaccgcggccgtatcaagctgtccatcaaagacgtagcagcagccaaggcttcgggc
gtttaa
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