Pseudomonas kielensis: Q1W70_10040
Help
Entry
Q1W70_10040 CDS
T09328
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pkj
Pseudomonas kielensis
Brite
KEGG Orthology (KO) [BR:
pkj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkj03032
]
Q1W70_10040 (gyrB)
03400 DNA repair and recombination proteins [BR:
pkj03400
]
Q1W70_10040 (gyrB)
Enzymes [BR:
pkj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Q1W70_10040 (gyrB)
DNA replication proteins [BR:
pkj03032
]
Prokaryotic type
DNA Topoisomerases
Q1W70_10040 (gyrB)
DNA repair and recombination proteins [BR:
pkj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Q1W70_10040 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
GyrB_hook
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WKL54880
LinkDB
All DBs
Position
complement(2175021..2177438)
Genome browser
AA seq
805 aa
AA seq
DB search
MSEENTYDSTSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDD
ISIIIHPDESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
GVSVVNALSEELILTVRRSGKIWEQTYVHGVPQEPMKIVGESETTGTQIHFKPSAETFKN
IHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEELFKYEGGLRAFVEYLNTNKTAVNQV
FHFNIQREDGIGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNTYIEA
EGLAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSD
FLLENPNEAKLVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE
LYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIG
RDEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKK
GKQEQYIKDDDAMEEYMTQSALEDASLHLNEDAPGISGEALERLVNDFRLVMKTLKRLSR
LYPQELTEHFIYLPAVSMEQLSDHAAMQDWLAQYEVRLRTVEKSGLVYKASLREDRERNV
WLPEVELISHGLSNYVTFNRDFFGSNDYKTVVSLGAQLSTLLDDGAYIQRGERKKAITEF
KEALEWLMNESTKRHTIQRYKGLGEMNPDQLWETTMDPAQRRMLKVTIEDAIGADQIFNT
LMGDAVEPRRDFIESNALAVSNLDF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaaatacgtacgactcaacgagcattaaagtgctgaaaggcctggatgcc
gtacgcaaacgtcccggtatgtacattggtgacacagacgatggcagcggtctgcaccac
atggtgttcgaggtggtcgataactcgatcgacgaagctttggctggccattgcgacgac
atcagcatcatcatccacccagatgaatcgatcaccgtacgcgacaacggtcgcggcatt
ccggtagacgtgcacaaagaagaaggcgtttcggcagccgaggtcatcatgaccgtgctg
cacgccggcggtaagttcgacgacaactcctacaaagtatccggcggtctgcacggtgta
ggtgtgtcggtagtgaacgcactgtctgaagagctgatcctgaccgttcgccgtagcggc
aagatctgggaacagacctacgtccacggtgttccgcaggagccgatgaagatcgttggc
gagagcgagacgaccggtacccagatccacttcaagccttcggctgaaaccttcaagaac
atccacttcagctgggacatcctggccaagcggattcgcgaactgtcgttcctcaactcc
ggtgtgggtatcgtcctcaaggacgagcgcagcggcaaggaagaactgttcaagtacgaa
ggcggcctgcgtgcgttcgttgaatacctgaacaccaacaagactgcggtcaaccaggtg
ttccacttcaacatccagcgtgaagacggcatcggcgttgaaatcgccctgcagtggaac
gacagcttcaacgagaacctgttgtgcttcaccaacaacattccccaacgcgatggcggc
acccacctggtgggcttccgttccgcgctgacgcgtaacctgaacacctacatcgaagcc
gaaggcctggcgaagaagcacaaggtcgccaccaccggtgacgacgcccgtgaaggcctg
acggcgattatctcggtaaaagtgccggacccgaagttcagctcccagaccaaggacaag
ctggtttcttccgaagtgaagaccgcagtcgagcaggaaatgggcaagtacttctcggac
ttcctgctggaaaacccgaacgaagccaagctggtggtcggcaagatgatcgacgccgcc
cgtgcccgtgaagcggcgcgtaaagcccgtgagatgacccgtcgtaaaggtgcgctggat
atcgccggcctgccgggcaaactggcggactgccaggaaaaagaccctgccctctccgaa
ctgtacctggtggaaggtgactctgctggcggttccgccaagcagggtcgtaaccgccgt
acccaggctatcctgccgctcaagggcaagatcctgaacgtggagaaggcgcgcttcgac
aagatgatctcttctcaggaagtaggcaccttgatcaccgcgttgggctgcggcattggc
cgtgacgagtacaacatcgacaagttgcgttatcacaacatcatcatcatgaccgatgct
gacgtcgacggttcgcacatccgtaccctgctgctgaccttcttcttccgtcagttgccg
gagctgatcgagcgtggctacatctacatcgcccagccgccgttgtacaaggtgaagaaa
ggcaagcaagagcaatacatcaaagacgacgacgccatggaagagtacatgacgcagtcg
gccctggaagatgcgagcctgcacctgaacgaggacgcaccgggtatctccggtgaggcc
ctcgagcgcctggtgaacgacttccgtctggtaatgaagaccctcaagcgcctgtcgcgc
ctgtacccacaggaactgaccgagcacttcatctacctgccggcagtgagcatggagcag
ttgtccgatcacgcagcgatgcaggattggctggctcagtacgaagtacgtctgcgtacc
gtcgagaagtcgggcctggtctacaaggccagcctgcgtgaagaccgtgagcgtaacgtc
tggctgccggaggtcgaactgatctcccacggcctgtcgaactacgtcaccttcaaccgc
gacttcttcggcagcaatgactacaagaccgtggtctccctgggggcgcaactgagcacc
ctgctggacgacggtgcgtacatccagcgtggcgaacgcaagaaagccatcaccgagttc
aaggaagcccttgagtggttgatgaacgagagcaccaagcgccacaccatccagcgctat
aaaggtctgggcgagatgaacccggatcagctgtgggaaaccaccatggacccagcacag
cgccggatgctcaaagtgaccatcgaagacgccattggtgcggaccagatcttcaacacc
ctgatgggtgatgcggtcgaaccacgccgtgacttcatcgaaagcaacgcgctggcagtg
tcgaacctggacttctga
DBGET
integrated database retrieval system
