Pseudomonas kielensis: Q1W70_11115
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Entry
Q1W70_11115 CDS
T09328
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pkj
Pseudomonas kielensis
Pathway
pkj00300
Lysine biosynthesis
pkj00470
D-Amino acid metabolism
pkj01100
Metabolic pathways
pkj01110
Biosynthesis of secondary metabolites
pkj01120
Microbial metabolism in diverse environments
pkj01230
Biosynthesis of amino acids
Module
pkj_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pkj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Q1W70_11115 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Q1W70_11115 (dapF)
Enzymes [BR:
pkj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Q1W70_11115 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
WKL55075
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Position
complement(2408776..2409606)
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGVGFDQLLIVEAPSNPEVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKSGIIELDIRNDGQISVNM
GAPRLVPADIPFQADVQANSYPVEVDGQTVELAAVSMGNPHAVLRVNDINNAPVHALGPK
IEHHPRFPARVNVGFLQVIDRNRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGQPVMMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaagatgcacggcctgggcaacgacttcatggtcctcgacctg
gtcagccagcacgcgcacattctgcccaagcacgccaaacaatggggtgaccgacacacc
ggtgtcggcttcgaccagctgctgatcgtcgaagcaccgagcaacccggaggtggatttc
cgttaccggatcttcaactccgacggctctgaagtggagcaatgcggcaatggcgcgcgt
tgcttcgcccgttttgtgctggacaagcgcctgacggccaagcgccagatccgcgtcgag
accaagagcggcattatcgaactcgatatccgcaatgacggtcagatcagcgtcaacatg
ggagcaccgcgcctggtaccggcggacatcccgttccaggccgacgtgcaagccaacagc
tacccggtcgaggtcgacggccagaccgtcgagttggccgccgtgtccatgggcaacccg
cacgccgtgctgcgcgtgaacgacatcaacaacgcgccggtgcatgcactggggccgaag
atcgaacatcacccgcgctttccggcacgggtcaacgtcggtttccttcaggtcatcgac
cgcaatcgtgcgcagttgcgcgtctgggaacggggtgccggggaaacccaggcctgcggt
accggtgcctgcgccgctgcagtggccgcgatcagccaggggtggatggattcgccgcta
ttgatcgacctgcccggcgggcgcttgtccattgaatgggcaggccctggccaaccggtg
atgatgaccggtccggcagtgcgcgtatacgaaggacaagtgcgtctttga
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