Pseudomonas kielensis: Q1W70_12555
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Entry
Q1W70_12555 CDS
T09328
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pkj
Pseudomonas kielensis
Pathway
pkj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pkj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Q1W70_12555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pkj03021
]
Q1W70_12555
Transcription machinery [BR:
pkj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Q1W70_12555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Rv2175c_wHTH
HTH_24
Sigma70_ECF
HTH_31
Sigma70_r3
HTH_17
MerR
Peripla_BP_3
HTH_29
FaeA
Motif
Other DBs
NCBI-ProteinID:
WKL55346
LinkDB
All DBs
Position
complement(2713542..2714060)
Genome browser
AA seq
172 aa
AA seq
DB search
MSSVQSPHSELVGALYRDHRGWLLAWLRRNVACPSKAEDLSQDTFVRLLGRETFKPPREP
RAFLVAIAKGLLFDYFRRAALEQAYLTELMLIPEGEQPSVEEQQLILEDLKTIDRLLGKL
SSKARAAFLYNRLDGLGHAEIAERLGVSVPRVRQYLAQGIRQCYVALYGEPA
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgtcagtccaaagccctcacagtgaactggttggtgcgttgtatcgcgaccatcgc
ggttggctattggcctggctacggcgcaacgtggcctgcccctccaaagccgaagacctg
agccaggacaccttcgtgcgcttgctcgggcgggaaacgttcaaaccgccccgcgaaccc
cgggccttcctggtggccatcgccaagggcctgctgtttgactatttccgccgcgccgca
ctggaacaggcctacctcactgaattgatgctgatccccgaaggcgagcaaccctcggtg
gaagaacagcaactgatcctcgaagacctcaagaccatcgaccgcctgctcggcaagctc
tcgagcaaagcccgcgccgccttcctctataaccgcctcgacggcctcggccatgccgaa
atcgccgagcgcctgggcgtctccgtgccacgggtgcggcaatacctggcccagggtatc
cgccagtgttatgtggcgctgtacggcgagcccgcatga
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