KEGG   Pseudomonas kielensis: Q1W70_16365
Entry
Q1W70_16365       CDS       T09328                                 
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
pkj  Pseudomonas kielensis
Pathway
pkj03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pkj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Q1W70_16365 (sbcB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pkj03400]
    Q1W70_16365 (sbcB)
Enzymes [BR:pkj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     Q1W70_16365 (sbcB)
DNA repair and recombination proteins [BR:pkj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     Q1W70_16365 (sbcB)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Q1W70_16365 (sbcB)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Q1W70_16365 (sbcB)
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: WKL51067
LinkDB
Position
3504351..3505778
AA seq 475 aa
MTSIFWYDYETTGISPRCDRPLQMAGIRTDLDLNEIEAPVNLYCRPSDDILPHPAACVIT
GITPTRLAEKGLCEADFMTRVHAQLAAPGTCGAGYNTLRFDDEMTRYSLYRNFFDPYARE
WQGGNSRWDLIDVVRAAYALRPDGIVWPQEEGRVTLKLERLTAANGLDHGQAHEALSDVR
ATIALARLIRDRQPKLYDWLFKLRSKQKVMDQIRLLQPMVHISGRFSADRSYVGVVLPLA
WHPRNRNALIVCDLHLDPEGLLADDVETLRQRLYSRRADLPEGTLPVPLKLIHINRCPVV
APLSVLRAEDQQRLQLDMALYQARALRLSDAQELWRDKVQAIYAQEDFTPSDDPEQQLYD
GFIGDRDRRLCEQVRAADPQQLAQEQWPFDDERLPELLFRYRARNFPETLSEQEQERWKL
FCQQRLSDARWGAPNTVQAFDEACEQWSQNATGGTLEVLQEWREYVALLRKRLNI
NT seq 1428 nt   +upstreamnt  +downstreamnt
gtgacttccattttctggtacgactacgaaaccaccggtatcagcccgcgttgcgaccga
ccgctgcaaatggccggcattcgcactgacctcgacctcaacgagatcgaggccccggtc
aatctctactgtcgacccagtgacgacatcctgccgcatccggccgcctgcgtgatcacc
gggatcaccccgacgcgcctggccgaaaagggcctgtgcgaagcggatttcatgacccgg
gtgcatgcgcaactggccgcgcccgggacctgcggcgccggttacaacaccttgcgtttc
gacgatgaaatgacgcgctacagcctgtatcgcaattttttcgacccctatgcccgtgag
tggcagggcggcaacagccgctgggacctgatcgatgtggtgcgtgcagcctatgcgtta
cgcccggacggtatcgtctggccgcaggaggaggggcgtgtcacgctcaagcttgaacgc
ctgacggccgccaacggcctggaccatggccaggcccacgaagccttgtccgatgtgcgc
gccaccattgccctggcgcggctgattcgcgatcggcagcccaagctttatgactggctg
ttcaagttgcgcagcaaacagaaagtcatggaccagattcgcctgttgcaaccgatggtg
catatttccgggcgcttttctgccgaccgcagttatgtgggagtcgtcctgccgctggcc
tggcacccgcgcaatcgtaatgcactgattgtctgcgacctgcacctggatcccgagggc
ttgctggcagatgacgtcgaaaccctgcgtcagcgcctgtacagccgccgtgcggatttg
cccgaagggacgctgccggtgccgctcaaactgattcatatcaaccgctgtccggtagtg
gcgccgttatcggtattgcgcgctgaggatcagcaacgactgcaattggacatggcgctg
tatcaggcgcgggcgctgcggctaagtgacgcacaggaactttggcgagataaagtccag
gccatttatgcccaggaggacttcacccccagcgatgatccggaacaacagttgtacgac
ggtttcattggcgaccgcgaccgacgtttatgcgagcaagtgagagcggccgatccacag
caattagcgcaagaacaatggccgttcgatgatgaacgtttaccggaattattatttcga
tatcgcgcacgtaacttccctgaaaccttgagtgaacaggagcaagagcgctggaaatta
ttctgtcagcagcgtttgagcgatgctcggtggggggcgcccaataccgtgcaggcattt
gatgaagcctgcgagcaatggtcgcagaatgccacgggcggaacgcttgaggttctgcag
gaatggcgcgagtacgtggcgctattgcgcaagcgtttgaatatttga

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