Pseudomonas kielensis: Q1W70_17920
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Entry
Q1W70_17920 CDS
T09328
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pkj
Pseudomonas kielensis
Brite
KEGG Orthology (KO) [BR:
pkj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkj03032
]
Q1W70_17920 (ihfB)
03036 Chromosome and associated proteins [BR:
pkj03036
]
Q1W70_17920 (ihfB)
03400 DNA repair and recombination proteins [BR:
pkj03400
]
Q1W70_17920 (ihfB)
DNA replication proteins [BR:
pkj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Q1W70_17920 (ihfB)
Chromosome and associated proteins [BR:
pkj03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Q1W70_17920 (ihfB)
DNA repair and recombination proteins [BR:
pkj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Q1W70_17920 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
WKL51359
LinkDB
All DBs
Position
3823714..3824010
Genome browser
AA seq
98 aa
AA seq
DB search
MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRAPRV
GRNPKTGQSVSLDGKFVPHFKPGKELRDRVNEDEEEGL
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtcggagttgatcgaacgaattgtcacccatcaagggctgctttcatccaag
gatgtagagttggccatcaagactatgcttgaacaaatgtcccaatgcctggcaactggt
gatcgcatcgagatccgtggctttggcagcttctccctgcactaccgcgcgcctcgtgta
ggccgcaacccgaagaccgggcaatcggttagcctggatggaaaatttgttccccatttc
aaaccgggcaaagagcttcgggatcgggtgaatgaagatgaggaggaggggctttga
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