Pseudomonas kielensis: Q1W70_18715
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Entry
Q1W70_18715 CDS
T09328
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pkj
Pseudomonas kielensis
Brite
KEGG Orthology (KO) [BR:
pkj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkj03000
]
Q1W70_18715
Transcription factors [BR:
pkj03000
]
Prokaryotic type
Helix-turn-helix
Other families
Q1W70_18715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_lid_14
GAF
AAA_5
Mg_chelatase
HTH_30
AAA
HTH_1
HTH_7
AAA_2
HTH_28
HTH_22
HTH_20
Mga
HTH_29
HTH_23
DUF134
HTH_11
AAA_7
PAS_9
Diguanyl_cycl_sensor
nSTAND3
HTH_17
Motif
Other DBs
NCBI-ProteinID:
WKL51499
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All DBs
Position
3982262..3984166
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AA seq
634 aa
AA seq
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MSLIKTTTPKLPHEARLAREKLHLEGEVPDGVLRAEIDASWRRSLSHGVHFNGKHELALE
SSASLDVLLASNRLLIDAALPAIDYLAERQGKEGLIILANSDATILAVEGRADRLKGSGL
QDITLGACWSEAVRGTNALGTALVEARPTLIDCGEHYLDRLSDFSCTSVPIRCPHGDILG
VLDLTREGPLGRAHDSSALLAMAVSQIESRVFNASYPDEIVLAFHNRRQYLESPWQGLLA
VSLGGQILAVSGQACQLLHAERSALVGRRCEEFLGVDGLQLLARLQQGGVGSLQTAKGEF
FYKTLRAPQRSINLSTPPRSSAKPLKAPVDLEALAGNNARYARALRMARQGLANELPVLL
LGETGTGKEVIARALHLAGARCDKPFVAVNCAAIPEGLIESELFGYREGAFTGSRRGGMI
GRLQQAHGGTLFLDEIGDMPLALQARLLRVLQDRKVAPLGAGEEQDIDVALICATHRDLK
RLVEDKLFREDLFYRVNGISVMLPALREREDFSALVARLLVKLDAPAVVLHDDLNRLLGG
YHWPGNIRQLEMVLRTALAMRESGDNVLTLDHLPDSMLDELNACERPQAGSIRENELELI
RQSLDSHQGNVSAAADALGISRATLYRKLKQLRS
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgagccttataaaaacaacaaccccaaagctgccacacgaagcccggctcgcccgggaa
aaactgcaccttgaaggcgaagtccccgacggcgtgttgcgcgcggaaatcgatgcttca
tggcgacgcagcctcagccacggcgtgcacttcaacggcaagcatgaactggcgctggaa
tcgagcgcgagcctggacgtgctgttggccagcaatcgactgctgatcgacgccgccctg
cccgccatcgactacctggccgaacgccagggcaaggaagggctgatcatcctcgccaac
tccgacgccaccatcctggcggtcgaaggccgtgccgatcgcctcaaaggcagcggactg
caggacatcaccctcggcgcctgctggagcgaagccgttcgcggcaccaacgcgctgggc
accgccctggtggaagcgcgaccgacgctgatcgattgcggcgaacactacctcgatcgc
ctgagcgatttctcttgcacctccgtccccatccgatgcccccacggcgacatcctcggg
gtgctcgacctcacccgcgaaggcccgctgggccgcgcccacgacagcagcgcgttactg
gccatggccgtcagccagatcgaaagccgggtgttcaacgccagttatccggatgaaatc
gtcctggcgttccacaatcgccggcaatacctcgaatccccctggcaaggcctgctggcc
gtgagtctgggcgggcagatcctcgcggtcagcggccaggcctgccagttgctgcacgct
gagcgttcggccctggtcggacgccgctgcgaagagtttctcggagtcgacggcctgcaa
ctgctggcgcgtctgcagcaaggcggggtcggcagcctgcaaacggccaagggcgagttc
ttctacaaaaccctgcgcgcgccccagcgctccatcaacctcagcacaccgccgcgcagc
agcgcaaaaccgctcaaggcgcccgtggacctcgaagccctggccggcaacaatgcgcgt
tatgcccgcgctttgcgcatggcccgtcagggcctggccaatgaactgccggtgttgctg
ctgggggaaaccggcaccggcaaagaagtcatcgcccgtgccctgcacctggccggcgcc
cgttgtgacaaaccgttcgtagcagtgaactgcgccgcgatccccgaaggcctgatcgag
tcggaactgttcggctaccgcgaaggcgcgttcaccggctcgcggcgcggcggcatgatc
gggcgcctgcagcaggcccatggcggcaccctgtttctcgatgaaatcggcgacatgccc
ctggccctgcaggcccgcctgttgcgagtgctgcaggatcgcaaggtggcgccgctgggg
gccggtgaagaacaggacatcgacgtcgcgctgatctgcgccacccaccgcgacctcaag
cgcctggtggaagacaaactgtttcgcgaagacctgttttaccgggtcaacggcatcagc
gtgatgcttccggccttgcgtgagcgcgaggatttcagcgctctggtcgcgcgtctgctg
gtcaagctggacgccccggccgtagtcctgcatgacgacttgaaccgcctgctcggtggt
taccactggccgggcaacatccgccaactggaaatggtcctgcgcaccgcgttggccatg
cgcgagtcgggggacaacgtactgaccctggatcacctgcccgacagcatgctcgacgaa
ttgaacgcctgcgaacgcccgcaggccggcagcatccgcgagaacgaactggagctgatt
cgccagtccctggacagccaccaaggcaacgtctcggctgccgccgacgccctgggcatc
agtcgcgcgaccctgtaccgcaagctcaaacagttgcgcagttga
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