Pseudomonas kielensis: Q1W70_20830
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Entry
Q1W70_20830 CDS
T09328
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pkj
Pseudomonas kielensis
Pathway
pkj00300
Lysine biosynthesis
pkj00470
D-Amino acid metabolism
pkj01100
Metabolic pathways
pkj01110
Biosynthesis of secondary metabolites
pkj01120
Microbial metabolism in diverse environments
pkj01230
Biosynthesis of amino acids
Module
pkj_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pkj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Q1W70_20830 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Q1W70_20830 (dapF)
Enzymes [BR:
pkj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Q1W70_20830 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WKL51884
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All DBs
Position
complement(4461663..4462478)
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AA seq
271 aa
AA seq
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MPLSFHKMHANGDDFVIVDSRNSPNPITSNLARRMGDRNRGIGFNQLAVMLDCDDADARL
VFWNADGSPLDACGSATRGAADMLMRESNMTSVALRTNRGLLTCERTSTGAISVNMGKPL
FNWVDIPLALEMDTSVLPLAGEPTACSMGNPHCTYFVDDLTAVEIETIGPAIETNPLFPL
RTNVHFVRIIDRARIRLRIWERGGGIPLGSGSCSCGAAVNGIRRGLLDRCVEVECDGGAV
TVQWDGVGPVFLTGPVETIYSGTIMDTLLKV
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgagttttcataaaatgcacgccaatggcgatgatttcgttatcgtggactcg
cgaaactcacccaatccaatcacaagcaatttggctcggagaatgggagatcgcaaccga
ggaatcggcttcaatcaactcgctgtgatgctcgattgcgatgatgcagatgcgcgtttg
gtgttctggaatgcggatggctcaccgctggacgcttgcggcagcgcaacgcggggggcg
gcagatatgctgatgcgcgaatccaatatgacttcggtagcactgcgaaccaaccgtggc
ctactgacttgcgaacgtacttcaaccggcgctatttccgtcaatatgggaaagccgctt
ttcaactgggtggatattcctctggctcttgaaatggatacttcagtgttgccacttgcc
ggtgaaccaacagcatgcagcatgggaaatccgcactgcacctacttcgtggatgacctg
acagccgttgaaatagagacgattggaccagcaattgaaaccaaccccttgtttccccta
aggacgaacgtgcatttcgtccggatcattgaccgagcgcgcattcggttgcgtatttgg
gagcgcggtgggggtattccgctgggttcaggctcctgctcttgtggcgccgccgttaat
ggaattcgtcgtggcttgttagaccgttgcgttgaggttgaatgtgacggcggggctgtg
acggttcaatgggatggcgtgggaccggtctttctcaccgggccggtggagacgatttat
tccggaacaatcatggatactctgttgaaagtttga
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