Pseudomonas kielensis: Q1W70_25375
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Entry
Q1W70_25375 CDS
T09328
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pkj
Pseudomonas kielensis
Brite
KEGG Orthology (KO) [BR:
pkj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkj03032
]
Q1W70_25375
03400 DNA repair and recombination proteins [BR:
pkj03400
]
Q1W70_25375
Enzymes [BR:
pkj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Q1W70_25375
DNA replication proteins [BR:
pkj03032
]
Prokaryotic type
DNA Topoisomerases
Q1W70_25375
DNA repair and recombination proteins [BR:
pkj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Q1W70_25375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WKL52709
LinkDB
All DBs
Position
5490104..5491141
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AA seq
345 aa
AA seq
DB search
MPDLTPADSLPPDLHYVDDTQPGIRRTILRGQFCYLDVAGQRITDPVEVKRLNALAVPPA
YTDVWICADPQGHLQATGRDARGRKQYRYHPRWREVRDGDKYSRLLEFGLALPKLRRHLE
AQLASPGHGRDKVMATVISLLDTTLIRVGNSQYARQNRSYGLTTLRTRHVSLNGSAIAFQ
FRGKSGIEHQITVKDRRLARIIKRCLEIPGQDLFQYLDEDGQRHTVTSSDINAYLHEVTA
GDFTAKDYRTWAGSSLALSALRELPWESATDARQHIVEMVKRIAKELGNTPAVCRKCYIH
PAVLDSYLLGTLAQLPTPRQRKHLNREEVGLMMFLQTLSQKPQGL
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgccggacctcacccccgccgactcgctgccaccggacctgcactatgtcgatgacacg
cagccgggtatccgccgcacaatcctgcgcggccagttctgttatctcgacgtggctggt
cagcgcattaccgacccggtggaagtcaaacgcctcaacgccctcgccgtgcctcccgcc
tacaccgacgtgtggatctgtgccgacccccagggccatttacaggccactggccgcgat
gcccgggggcgcaagcaataccgctatcacccacgctggcgggaagtgcgcgatggcgac
aagtattcgcgcctgctggagttcggcctggcactgcccaagctgcgccgtcatctggaa
gcgcaactggccagcccggggcatggccgcgacaaggtcatggccacggtcatcagcctg
ctcgacaccaccttgatccgcgttggcaacagccaatatgcccggcagaaccgctcctac
ggcctgaccaccttgcgcacccggcatgtgtcgctgaacggcagcgcgatcgccttccag
tttcgcggcaagagcggcatcgaacaccagatcaccgtcaaggaccggcgcctggcccgg
atcatcaagcgctgcctggaaatccccgggcaagacctgttccagtacctggacgaagac
gggcaacggcacaccgtgacctcctcggacatcaacgcctacctgcatgaagtgacggcg
ggcgacttcaccgccaaggactaccgcacctgggccggcagcagcctggccctgtcggcg
ctgcgcgagttgccctgggagtcggcgaccgacgccaggcagcacatcgtcgagatggtc
aagcgcattgccaaggaactgggcaacacccctgccgtgtgccgcaagtgctacatccat
ccggccgtgctcgacagctacctgctcggcaccctggcgcaactgcccacgccacgccaa
cgcaagcacctgaaccgcgaagaagtcgggctgatgatgttcctgcaaacgctctcgcaa
aagccacagggcttgtaa
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