Pseudomonas kurunegalensis: QQ992_06125
Help
Entry
QQ992_06125 CDS
T09327
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pkk
Pseudomonas kurunegalensis
Pathway
pkk03030
DNA replication
pkk03430
Mismatch repair
pkk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QQ992_06125 (dnaE)
03430 Mismatch repair
QQ992_06125 (dnaE)
03440 Homologous recombination
QQ992_06125 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkk03032
]
QQ992_06125 (dnaE)
03400 DNA repair and recombination proteins [BR:
pkk03400
]
QQ992_06125 (dnaE)
Enzymes [BR:
pkk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QQ992_06125 (dnaE)
DNA replication proteins [BR:
pkk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QQ992_06125 (dnaE)
DNA repair and recombination proteins [BR:
pkk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QQ992_06125 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
DUF5925
HROB
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WJD63873
LinkDB
All DBs
Position
1364669..1368193
Genome browser
AA seq
1174 aa
AA seq
DB search
MSVPFVHLRVHSEFSLVDGLVRVKPLAKALAGMNMPAVAITDQSNMCSLVKFYKTAMGAG
IKPICGADLWLAGADPEAPLSRICFLAMDPKGYRNLTELISRGWTDGQRNGLVILQREWI
AHASEGLIALSAGKEGDIGMALLAGRDDEAQALLQDWMGMFPDRFYVEVQRTNRARDEEY
VHAAVALADKLGAPLVATNDVRFLKQADFDAHETRVCIGEGWTLDDPRRPRGYSDQQYLK
SAEEMAELFSDLPDAIANTVEIAKRCNIQVQLGKYFLPDFPTPNGMGIDDYLRHVSHEGL
EERLAVLWPKETTPNYEEKRQVYLDRLKFELDIIIQMGFPGYFLIVMDFIKWAKNNDVPV
GPGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERISMPDFDVDFCMDGRDRVIDYV
AEAYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFLKGDEDAREIWDMALKLEGVTRGTGKHAGGVVIAPTKLTDFSPIACDEEGGGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIKWAMEIINREQTKKNLPDLNIDFIPLDDRKTYE
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCVANNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHY
PAPFMAAVLSADMHNTDKVVVLVEEVRSMKLRLDAPDVNFSDFKFTVNNDGRIVYGLGAI
KGVGEGPVEAIVEARAQGGPFKDLFDFCERIDLKRVNKRTLDALIRSGALDRLGPHFHDE
IKAYHANIDINRATLISALGEAIKAAEQAAHTADSGHVDLFGSMFDEADVDVYANHRKVR
ELTLKERLKGEKDTLGLYLTGHPIDEYEAEIRRFARQRIVDLKPSRETQTIAGMIIALRV
MKNKKGDKMGFVTLDDRSGRIEASLFADAFMAAQSLLHNDAMVVVEGEVSNDDFSGGLRL
RVKQVMTMEDARTKLAESLRLKVAHDALKGDRLKWLGELITRHRGACPITLEYTGSDAKA
MLQFGDQWAIDPADGLIQALRDQFGRENVFLQYR
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttcccttcgttcacctgcgcgtccattccgaattctcgctggtcgacggcctg
gtgcgggtcaaaccgctggccaaggcgctggcggggatgaacatgccggcggtggcgatc
accgaccagagcaacatgtgctcgctggtgaagttctacaagaccgccatgggtgccggc
atcaagccgatctgcggcgccgacctgtggctggccggtgccgacccggaagcgccgctg
tcgcgcatctgcttcctggccatggaccccaagggctaccgcaacctcaccgagttgatc
tcgcgtggctggaccgacggccagcgcaatggcctggtcatcctgcagcgtgaatggatc
gcccatgccagtgaaggcctgattgccctgtctgcgggcaaggaaggcgacattggcatg
gccttgctggccggccgggacgacgaagcccaggccctgctgcaagactggatgggcatg
tttcccgatcgtttctacgttgaagtgcagcgcaccaaccgcgcccgtgacgaagagtac
gtgcacgctgcggtagcgctggcagacaagctcggcgccccgctggtggccaccaacgac
gtgcgcttcctcaagcaagccgacttcgatgcccatgaaacccgcgtgtgcattggtgag
ggctggaccctcgacgacccgcgccgcccgcgtggctacagcgatcagcaatacctgaag
tcggccgaggaaatggccgagctgttcagcgacctgcctgatgccatcgccaacacggtc
gaaatcgccaagcgctgcaatatccaggttcagctgggcaagtacttcctgcccgacttc
cccacgcccaatggcatgggtatcgacgattacttgcggcatgtgtcccacgaaggcctg
gaggagcgcctggcggtgctgtggccgaaagagaccacgcccaattacgaagaaaagcgc
caggtgtacctcgaccgcctgaagttcgagctggatatcatcatccagatgggcttcccc
ggttacttcctgatcgttatggacttcatcaagtgggccaagaacaacgacgtgccggta
ggcccgggccgtggttcgggtgctggctcgctggtggcctacgtactcaagatcaccgac
ctcgacccgctggcctacgacctgctgttcgagcgcttcctcaaccctgaacgtatttcc
atgcccgacttcgacgtcgacttctgcatggacggccgtgaccgggtgatcgactatgtg
gccgaggcttacggccgcaatgcagtgagccagatcatcaccttcggtaccatggccgcc
aaggcggtggtgcgtgacgtggcgcgggtgcagggcaagtcctacggcctggccgaccgc
ctgtcgaagatgatcccgttcgaagtgggcatgaccctggagaaggcctacgagcaggaa
gagatcctgcgcgacttcctcaaaggcgacgaagacgcccgcgaaatctgggacatggcc
ctgaagctggaaggtgtgacccggggtaccggcaagcacgccggtggtgtggttatcgcg
ccgaccaagctcaccgacttttcgccgattgcctgtgatgaagagggcggcgggctggta
acccagttcgacaaggatgatgtcgaggctgcgggcctggtgaagttcgacttcctcggc
ctgcgtacgctcaccatcatcaagtgggcgatggagatcatcaaccgcgagcagaccaag
aagaacctgccggatctcaacatcgacttcatcccgctggacgaccgcaagacctacgag
ttgctgcaaaaggccgaaaccacggcggtgttccagctcgaatcgcgcggcatgaaggag
ctgatcaagaagctcaagcctgactgcctggaagacctgatcgcactggtggcattgttc
cgcccgggcccgctgcaatcgggcatggtggacgacttcatcaaccgcaagcacggccgt
gccgaactggcctacccgcactccgactatcagtacgaaggcctcaagccggtactggca
ccgacctacggcatcatcctgtatcaggaacaggtgatgcagattgcccaggtgatggcg
ggctataccctgggcggcgcggacatgttgcgccgggcgatgggtaagaaaaagcccgag
gaaatggccaagcagcgcggtggtttcatcgaaggctgcgtggccaacaatatcgatgcg
gaccttgccggtaacatcttcgacctggtagagaagttcgccggttacgggttcaacaaa
tcccactccgcggcttatggcctggtgtcgtaccagaccgcctggctgaaaacccactac
ccggccccgttcatggccgcggtactgtcggcggacatgcacaacaccgacaaggtggtg
gtgctggtcgaggaagtgcgcagcatgaagctgcgcctcgacgcgccggatgtgaacttc
tccgacttcaagttcaccgtcaacaacgacggccgcatcgtctatggcctgggtgccatc
aagggcgtgggtgaaggcccggtggaggcaattgtagaagcccgtgcccagggcggcccg
ttcaaggacctgttcgacttctgtgaacgtatcgacctcaagcgggtcaacaagcgtacc
ctggatgcgttgatccgaagtggtgcgctggaccgcctggggccgcatttccatgacgag
atcaaggcctatcacgccaacatcgacatcaaccgtgcaaccttgatctccgcgttgggt
gaggccatcaaggctgccgagcaggcggcccataccgctgacagcggccatgtcgacctg
ttcggcagcatgttcgacgaggcggatgtcgatgtttatgccaaccaccgcaaggtgcgc
gagctcaccctcaaggagcgcctgaagggcgagaaggacacccttggcctgtacctaacc
ggccatccgatcgacgagtacgaggccgaaatccgccgctttgcccgccagcgcatcgtc
gacctgaagccgtcgcgtgaaacccagactatagccggcatgatcattgccctgcgggtg
atgaagaacaagaagggcgacaagatgggctttgtcacgctggatgaccgctccgggcgc
atcgaggcatcgttgttcgccgatgcgttcatggcggcacagtccttgctgcacaacgat
gccatggtggtggtggagggtgaggtcagcaacgacgacttctccggtggcttgcgcctg
cgggtcaagcaggtgatgaccatggaagatgcgcgcaccaagctggccgaaagcctgcgc
ctgaaggtggcgcacgacgcattgaagggcgaccgcctgaagtggctgggcgagctgatt
acccgccatcgcggtgcctgcccgattaccctggaatacaccggcagcgatgccaaggcc
atgctgcagttcggcgaccagtgggcaatcgacccggccgatgggttgattcaggcgctg
cgtgaccagttcgggcgtgagaacgtcttcctgcaatatcgttga
DBGET
integrated database retrieval system
