Pseudomonas kurunegalensis: QQ992_06180
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Entry
QQ992_06180 CDS
T09327
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pkk
Pseudomonas kurunegalensis
Brite
KEGG Orthology (KO) [BR:
pkk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pkk03016
]
QQ992_06180 (truD)
Enzymes [BR:
pkk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
QQ992_06180 (truD)
Transfer RNA biogenesis [BR:
pkk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QQ992_06180 (truD)
Prokaryotic type
QQ992_06180 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WJD63884
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All DBs
Position
1378810..1379868
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AA seq
352 aa
AA seq
DB search
MTELELLGPRASGEPLGTAVLKAVAEDFQVDEVLDIPLSGQGEHLWLWVEKRDLNTEEAA
RRLARAAGVPVRTISYAGLKDRQALTRQWFSLHLPGKADPDLSRAEDASLRVLKQVRHQR
KLQRGAHSANGFTLRLTALAADHQALDARLEQLKQHGVPNYFGTQRFGHGGGNVHDALDW
AARKALPEQRNVRSRLLSAGRSYLFNQVLAARVAEGSWARAQVGDLLAFTDSRSFFPAGE
AECADPRLAILDLHPTGPMWGEGASPADGATARLENAVGADQPALCQWLAQAGMDHERRI
LRLPIGGLTWHYPEPDILQLEFVLPAGCFATVVVREVVDLVSAGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaactggaactgctgggcccgcgcgcatcgggtgaaccactgggcaccgccgtc
ctcaaggcggtggccgaagacttccaggtcgacgaagtgctggatattccactgtccggc
cagggcgagcacttgtggctatgggtcgagaagcgtgacctgaacaccgaagaggccgct
cgccgcctggcgcgcgccgccggtgtgccggtgcgcaccatcagctatgccgggctcaag
gaccgtcaggccctgacccgtcagtggttcagcctgcacctgccaggcaaggccgacccg
gacctgtcgcgtgccgaggatgccagcctgcgcgtgctcaagcaggtgcgtcaccagcgc
aagctgcagcgtggcgcgcattcggccaacggcttcaccctgcgcctgacggccctggcg
gcggatcaccaggcgctggacgcgcgcctggaacagctgaagcagcacggtgtacccaac
tatttcggcacccagcgcttcggtcacggcggcggcaacgtccatgacgccctcgactgg
gcggcgcgcaaagccttgcccgagcagcgcaacgtgcgttcgcggctgctttcggccggg
cgcagctacctgttcaatcaggtgctggctgcgcgtgtcgccgaaggtagctgggcgcgg
gcgcaggtcggcgacctgctggcattcactgacagccgtagctttttcccggcgggagag
gcggaatgtgccgacccgcgtctggcgattctcgatctgcacccgaccggcccgatgtgg
ggcgagggcgcttcgcctgcggacggggccactgcccgcctggaaaacgccgtcggtgca
gaccaaccggcactttgccagtggttggcccaggcgggcatggatcacgaacggcgcatt
ttgcggctccctattggcggcctgacatggcattatcccgagcctgatatcctgcaactg
gaattcgtcctgccggccggatgcttcgccaccgtggtggtgcgtgaagtcgtggatctg
gtgtcggcagggcagacggacagcccatgcgtattctga
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