Pseudomonas kurunegalensis: QQ992_07015
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Entry
QQ992_07015 CDS
T09327
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pkk
Pseudomonas kurunegalensis
Pathway
pkk00521
Streptomycin biosynthesis
pkk00523
Polyketide sugar unit biosynthesis
pkk00525
Acarbose and validamycin biosynthesis
pkk00541
Biosynthesis of various nucleotide sugars
pkk01100
Metabolic pathways
pkk01110
Biosynthesis of secondary metabolites
pkk01250
Biosynthesis of nucleotide sugars
Module
pkk_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pkk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
QQ992_07015 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
QQ992_07015 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
QQ992_07015 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
QQ992_07015 (rfbB)
00525 Acarbose and validamycin biosynthesis
QQ992_07015 (rfbB)
Enzymes [BR:
pkk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
QQ992_07015 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
adh_short
GARS_N
Motif
Other DBs
NCBI-ProteinID:
WJD64045
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All DBs
Position
1558123..1559193
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AA seq
356 aa
AA seq
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MTILVTGGAGFIGANFVLDWLTGSDEPVVNLDKLTYAGNLQTLSSLEGDQRHIFVHGDIG
DSELVARLLKEHQPRAIVNFAAESHVDRSIHGPEDFIETNIVGTFRLLEAVRAHWGNLDE
KARQAFRFLHVSTDEVYGSLAADEPAFTETHQYQPNSPYSASKAASDHLVRSYHHTYGLP
VLTTNCSNNYGPYHFPEKLIPLMIVNALAGKPLPVYGDGQQIRDWLYVKDHCSAIRRVLE
AGTTGEVYNVGGWNEKPNLEIVSRVCALLDELRPRTDGKPYADQITYVTDRPGHDRRYAI
DARKLERELGWKPAETFETGIRKTVVWYLDNQKWVQNVQSGSYRDWVEKNYAGRSA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgactattttggtaacaggtggtgctggctttatcggcgcaaactttgtcttggactgg
ttgactggctcggacgagcccgtcgtcaacctcgacaaactcacctacgcaggcaacctg
caaaccctgagcagcctggagggtgaccaacgccatatcttcgtgcacggcgacattggc
gactccgaactggtagcccgcctgctcaaagaacatcaaccacgcgctatcgtcaacttc
gccgccgagtcccacgtcgaccgctcgatccacggcccggaagacttcatcgaaaccaac
atcgtcggcaccttccgcctgctggaagccgtgcgcgcacattggggcaacctggacgaa
aaggcccgccaggcgttccgcttcctgcatgtgtccaccgacgaagtgtacggctcgctg
gcagccgacgaacctgccttcaccgaaacccaccagtaccagccgaacagcccatactct
gccagcaaggccgccagtgaccatctggtgcgctcgtaccaccacacctacggcctgccg
gtgttgaccaccaactgctcgaacaactacggcccgtaccacttcccggaaaagctcatc
ccgctgatgatcgtcaacgccctggctggcaagccactgccggtgtatggcgatggccag
cagattcgcgactggctgtacgtgaaagatcactgtagcgccatccgccgcgtgctggaa
gcgggcactaccggcgaggtgtacaacgtgggcggctggaacgaaaagcccaatctggaa
atcgtcagccgtgtgtgcgccctgctggacgaactgcgcccccgcaccgacggcaagcct
tacgccgaccagatcacttacgtgaccgaccgaccaggccatgaccgccgctacgccatc
gacgcccgcaagctggagcgcgaactgggctggaaacccgccgaaaccttcgaaaccggt
attcgtaaaaccgtcgtctggtacctcgacaaccagaaatgggttcagaacgtacagtcc
ggcagctaccgcgactgggtagagaagaactacgcagggcgttctgcatga
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