Pseudomonas kurunegalensis: QQ992_08120
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Entry
QQ992_08120 CDS
T09327
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pkk
Pseudomonas kurunegalensis
Brite
KEGG Orthology (KO) [BR:
pkk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkk03400
]
QQ992_08120
DNA repair and recombination proteins [BR:
pkk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QQ992_08120
Archaeal homologous recombinant proteins
QQ992_08120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
WJD64241
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All DBs
Position
complement(1800430..1801668)
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AA seq
412 aa
AA seq
DB search
MRLFHTSDWHLGQSLHGQERDFEHACFLDWLLGQLRLRQPDALLIAGDIFDTVNPPVKAQ
ERLYDFIVQAHEQQPKLDIVMIAGNHDSGSRIELPAALMRRLRTHALGRVHWLDEGQLDA
ERLLIPLTNGRGKVAAWCLALPFLRPAEVTGPHLGDDYLQGITQVHQQLIAAAQKKRKKD
QALIAISHAHMAGGAVSEDSERSLIIGNAEALPAKLFDKAISYVALGHLHKPQKVNREER
IRYSGSPIPLSFAEINYPHQVLEVELDGSGLVSVEPRPVPRAVALQRVGPAPLGELLQQL
ADLPVVDLLEDPNRQPWLEVRVVLDEPQPDLRQQIETALEGKAVRLIRISAEYAGRTSAE
DDDLAFVELAQMTPQDLFSRAWEQAYGNPADEQALADFALLLQDVQQEEEQP
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttcatacctccgactggcacctgggccaaagcctgcacggccaggaacgc
gacttcgaacacgcctgcttcctcgactggttgctcggccaactgcgcctgcgccagccc
gatgcgctgctgatcgccggcgatatcttcgacacggtcaacccgccggtcaaagcccag
gaacgtctctacgacttcatcgtccaggcccacgagcagcagcccaagctggatatcgtg
atgatcgccggcaaccacgactcgggctcgcgcatcgagttgcccgccgccttgatgcgc
cgcctgcgtacccatgccctgggccgtgtgcattggctggacgaaggccagctggatgcc
gagcgcctgttgattccgctgaccaatggccgtggcaaggtcgccgcctggtgcctggcc
ctgcccttcctgcgcccggcggaagtgaccggcccgcacctgggtgacgactacctgcaa
ggcatcacccaggtacaccagcaactgatcgccgccgcgcaaaaaaagcgcaagaaagac
caggcgctgattgccatcagccatgcgcacatggccggtggcgcggtgtcggaggactcc
gagcgcagcctgatcatcggcaacgccgaggcgctgccggccaagctgttcgacaaggcc
atcagctacgttgccctgggccacctgcacaagccgcagaaggtcaaccgcgaagaacgt
atccgctacagcggctcgccgatcccgctgtcgttcgctgaaatcaactacccgcaccag
gtgctggaagtggagctggacggcagcggcctggtcagcgtcgagccgcgcccggtaccg
cgcgccgtggccctgcaacgggttggcccggcaccgttgggcgaactgctgcagcaactg
gctgacctgccggtagtcgacctgctcgaagaccccaaccgccaaccctggctggaagtg
cgggtggtactggacgagccgcaacccgacctgcgccagcagatcgaaaccgccctggaa
ggcaaggccgtgcgtcttatccgtatcagcgctgaatacgctggccgcaccagcgccgaa
gacgatgacctggcctttgtcgagctggcccagatgaccccgcaggacctgttcagccgc
gcctgggaacaggcctacggcaaccccgccgacgagcaggcgctggccgactttgccctg
ctgttgcaggacgtgcagcaggaagaggagcagccatga
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