Pseudomonas kurunegalensis: QQ992_08605
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Entry
QQ992_08605 CDS
T09327
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pkk
Pseudomonas kurunegalensis
Pathway
pkk00071
Fatty acid degradation
pkk00280
Valine, leucine and isoleucine degradation
pkk00310
Lysine degradation
pkk00362
Benzoate degradation
pkk00380
Tryptophan metabolism
pkk00410
beta-Alanine metabolism
pkk00640
Propanoate metabolism
pkk00650
Butanoate metabolism
pkk00907
Pinene, camphor and geraniol degradation
pkk00930
Caprolactam degradation
pkk01100
Metabolic pathways
pkk01110
Biosynthesis of secondary metabolites
pkk01120
Microbial metabolism in diverse environments
pkk01200
Carbon metabolism
pkk01212
Fatty acid metabolism
Module
pkk_M00087
beta-Oxidation
pkk_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pkk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
QQ992_08605 (fadB)
00650 Butanoate metabolism
QQ992_08605 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
QQ992_08605 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
QQ992_08605 (fadB)
00310 Lysine degradation
QQ992_08605 (fadB)
00380 Tryptophan metabolism
QQ992_08605 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
QQ992_08605 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
QQ992_08605 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
QQ992_08605 (fadB)
00930 Caprolactam degradation
QQ992_08605 (fadB)
Enzymes [BR:
pkk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
QQ992_08605 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
QQ992_08605 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
QQ992_08605 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
QQ992_08605 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NfeD1b_N
SDH_protease
Motif
Other DBs
NCBI-ProteinID:
WJD64335
LinkDB
All DBs
Position
1912396..1914543
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPEAELVAGNLEANRIFNAFEDLEVPTVAAINGIALGGGLE
MCLAADYRVMSTSAKIGLPEVKLGIYPGFGGTVRLPRLIGSDNAIEWIAAGKENRAEDAL
KVGAVDAVVAPELLLAGALDLIKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSVAESLIGLFLNDQEL
KRKAKAHDEIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGNRVDKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENPKVKQAVLAEVEGQVK
EDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQKNGKGFYAYETDKRGKP
KKVFDATVLDVLKPVVFEQREVTDEDIINWMMVPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGPLYHPTAKLREMAKNGQRFFN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgagctc
aagttcgacctcaagggtgagtccgtcaacaagttcaaccgcctgaccctgaacgagctg
cgccaggccgtcgatgccatcaaggccgatgcctcggtcaagggcgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgagttcgtcgacaacttcaagctg
cccgaggccgaactggtcgccggcaacctggaagccaaccgcatcttcaacgccttcgaa
gacctcgaagtgccgaccgttgccgccatcaacggcatcgccctgggcggtggcctggaa
atgtgcctggccgccgactaccgggtcatgtccaccagtgccaagatcggcctgccggaa
gtcaagctgggtatctacccgggctttggcggcaccgtgcgcctgccacgcctgatcggc
tcggacaacgccatcgagtggattgccgccggcaaggaaaaccgcgccgaagacgccctg
aaagtgggtgccgtcgacgctgtggtcgcccctgagctgctgctggccggtgccctggac
ctgatcaagcgcgccatcagtggcgagctggactacaaggccaagcgccagccgaagctg
gaaaagctcaagctcaatgccatcgaacagatgatggccttcgaaaccgccaagggcttc
gtcgctggccaggccggcccgaattacccggccccggtcgaagccatcaagaccatccag
aaagctgccaacttcggccgcgacaaggcgctggaggtagaagccgcaggctttgccaag
ctggccaagacctcggttgccgaaagcctcatcggcctgttcctgaacgaccaggagctc
aagcgcaaggccaaggcgcatgacgaaatcgcccacgacgtgaagcaggctgccgtgctc
ggcgctggcatcatgggtggcggtatcgcttatcagtcggcggtcaagggcaccccgatc
ctgatgaaggatatccgcgaggaagccatccagctgggtcttaacgaggcttccaagctg
ctcggcaaccgcgtcgacaagggccgcctgaccccggccaagatggccgaggcgctcaac
gccattcgcccgaccctgtcctatggcgatttcgccaatgtcgacatcgtcgtcgaagcc
gtggtcgagaacccgaaagtgaagcaggccgtgctggctgaagtggaaggccaggtgaag
gaggatgcaatccttgcctccaacacctcgaccatctccatcaacctgctggccaaggcg
ctcaagcgcccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagtgaagtggcggtcgccaccaccgtggcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgcccgggcttcttggtc
aaccgcgtgctgttcccgtacttcggcggcttcgccaagctggtcagcgccggtgtcgac
ttcgtgcgtatcgacaaggtgatggaaaagttcggctggccaatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggccaccacggccgcgacgtgatggccgaaggcttc
ccggaccgcatgaaagacgaccgccgctcggccgttgacgcgctgtacgaggccaaccgc
ctgggccagaagaacggcaagggcttctatgcctacgaaaccgacaagcgcggcaagccg
aagaaagtcttcgacgccaccgtgctggacgtgctcaagcctgtcgtcttcgagcagcgt
gaagtcaccgacgaagacatcatcaactggatgatggtcccgctgtgcctggagaccgtg
cgttgcctggaagacggcattgtcgaaaccgccgccgaagccgacatgggcctggtctac
ggcattggtttccctcccttccgcggtggtgcgctgcgctacatcgactcgatcggtgtg
gccgaattcgttgccctggccgatcagtacgccgacctggggccgctgtaccacccgacc
gccaagctgcgtgaaatggccaagaacggccagcgcttcttcaactga
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