Pseudomonas kurunegalensis: QQ992_09055
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Entry
QQ992_09055 CDS
T09327
Name
(GenBank) NEL-type E3 ubiquitin ligase domain-containing protein
Organism
pkk
Pseudomonas kurunegalensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NEL
DUF6543
LRR_8
LRR_4
Motif
Other DBs
NCBI-ProteinID:
WJD64423
LinkDB
All DBs
Position
2009599..2013918
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AA seq
1439 aa
AA seq
DB search
MTELKTDPLREQATDAFITQLLPGWLKNLSHEQLKTLRSCFQQHVQSQQAVQHALAGLEP
LDTFASTRLQAQLRVTLAQDIAIDTVQWREERRRLEANEAGPTRHERYFVRLPGLQKLLQ
NFKRNETFFPLTGLVYPAEPAAEHSDQVLSADSARLVEACRTLDVGQQYQQHLNSVLNTD
CLATLAEDKRQQLRLAIELAALQGQLLSDELALLRCCVDDHPVTNLAGLRLVAGWLKTLD
APVEGAMAFEVQALRIPAPNTSPFGVRRVILYLPGAPGRSLHAFASWRDASLALGTWLQK
PACQKAFVQRIALADRPAFLETLHKRLEDTRPDATCECVPIDVNVFQALANLHAERIRGD
ARLLAVPTAQIDARVSAEHWQALASAGTSLLNLAGLFVPVIGALLVADLVAQTLGEFCEG
VRDWQLEHQHEAIEHLMGVVETVVISAALVAGTSLIAKGFTRSARLDRRVPVLNDAGMPR
LGLMVTENPLDWAGEKLLLSRLWPQAQALDDSRVGHILKVADIDQEHLRGLLVERRTLPV
QLRDTLERFAADARVEAFFDQLTQGRVDDAELFLFCTDTLKLAALPRAEQVLTVIEQTAR
LRGPLFDFCSHRYLPADDVLPLMRRDFKGLPDAYALEVLKVANEGQRDRMLSEQRIPLAI
AERARELLQVARLTRMREGLFLKASYHPDTVALVFALLRKHARLSAASDIQLREGSDVGR
VLARLNPQADPQHVTTVLVRREGVFKCYDLQGREQNVHLDDPEDLTEVLARHLARDDLAR
LTWDGAQARAQMANALRSWLPATREAQLELMGWRAIDVPHNPLRRLPDGRFGYLLNGRDG
LREPLRRDLYEAVGTLYPSLDAQELEEYVTLLLQRPESAYAVIIAQYREYLALDQALDDW
MRDAPQGRLREVRRQAADTFRRCWRLQVPDGQAEAAHQAVNRFSLVGADIGNLPVLPEGT
NFMHVTELVLAGLRIESLPRGFLHCFSRLRRLDLFDNQLTELPVGIDDLPQLTSLGLSHN
RLNLTEASVRTLGSMVLLQELNLSFNPLGAISLRLAGLSHLRVLSLRRANLTAVPVGVVR
SGRLEIVDLRDNQISQLPEALFRAPLQLRRALLLDNNALPVADRDRLVAPDPMRLPVLPP
TDPFMQSRQRWLAFVEPAAMAASTRHWDTLRAYERSDEFFRLLTLLSETSDYRQQPQSLA
SRVWSMIEAANGDSSLRTDLFELAAARGCVDRMISCFSRLEVRVMLAQAMRAGGEAGEEQ
ALLELATGLFRLERVEAIAQAEIERQTTLEADLLRSRGYTQAQADTQASERVDAIEVNLA
YRVGLARTLKLPGQPKTMQFQPLAKINQQRLANAAASVRWASRTEALVAFVSQRDFWVAY
LERRHAARFAEVKAPFWDRLEEATDESAAAQVQREFDEAVRRLVVQLTRAALGNHPEAL
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgactgagctgaaaacagacccgctacgcgagcaagccacagacgccttcatcacccag
ctactgcctggctggctaaaaaacctgagccatgagcaactgaaaaccctgcgcagttgc
tttcagcagcacgttcagagccagcaagccgttcagcacgcacttgccgggctcgaaccg
ttggataccttcgccagcacacgcctgcaagcgcagttgcgggtgacattggcccaggac
atcgcaattgacactgttcagtggcgcgaggaacgtcgtcgcctggaggccaatgaagct
ggccctacgcgacacgagcgctatttcgtccgcctccctgggctgcagaaacttctgcag
aacttcaaacgtaatgaaacctttttcccgctcaccggcctggtctatccagccgaacct
gcagcggagcactcggaccaggtactttcggcagatagcgcgcggttggttgaggcctgt
cgcacgctcgatgttggccagcagtatcaacagcacctgaacagcgtgttgaacacagac
tgcctggccacgctggcagaagacaaacgccagcaactgcgcttggccatcgagttggcg
gccttgcaggggcaattgctgagcgatgagctggcgctgctgcgctgttgcgtcgacgat
catccggtgaccaaccttgccgggctcaggctggtcgcaggttggttgaagacgttggac
gcacctgtggaaggcgcgatggcttttgaggttcaggcgctgcggataccggccccaaat
acatctccgttcggggtgcggcgcgtaatcctttacttgcctggcgcgccagggcgatca
ctgcacgcctttgccagctggcgagatgccagcctggctttgggcacatggttacaaaaa
cctgcctgccaaaaggcgttcgtccaacgtattgcccttgcagaccgcccagcctttctt
gaaaccttgcacaaacgcctggaagacaccaggcctgatgcgacatgcgagtgtgtaccg
atcgatgtgaatgtgtttcaggccttggccaatctgcacgccgaacgtattcgtggtgat
gcccggcttctggcggtgcccaccgcgcagatcgatgcgcgtgtcagtgccgagcactgg
caggcattggcctcggcgggcacgagcctgctcaacctggccgggctgttcgtgccggtg
atcggtgcgttgctggtggctgacctggtggcgcaaacgctgggcgagttctgcgagggt
gtgcgggactggcagttggagcaccagcacgaagccattgagcacctgatgggtgtggtc
gagaccgtggtgatcagtgcggccctggtggcgggtacctcgttgatcgcgaagggcttc
acgcgcagtgcaaggctcgaccggcgcgtgccggtactgaatgatgcgggcatgccacgg
ctcgggttgatggtcaccgaaaaccctctggattgggcgggggaaaagctgttgctgagc
cgcctctggccacaagcacaagcgctggatgactcacgtgtcgggcacatcctcaaggtt
gccgatatcgaccaggagcacttgcgcggcctgctggtggagaggcgtacgctgccggtg
caattgcgcgatacccttgaacgtttcgctgcagatgcacgcgttgaggcttttttcgac
caattgacccaaggccgggtcgatgacgcggagctgtttctgttttgcaccgacaccctc
aagcttgctgccttgccccgagccgagcaggtcttgacggttatcgagcaaacggcccgc
ttgcgcgggccattgtttgacttctgctcccatcgttatctgcctgccgatgacgtgttg
cctttgatgcggcgggacttcaaaggcctgccagatgcctacgccctcgaagtgctcaaa
gtggcaaacgaagggcagcgcgaccgcatgctcagtgaacagcgcataccgctggcgatt
gccgagcgggcccgcgaactgttgcaggtggcacggctgacgcggatgcgcgaaggtttg
tttctcaaggccagttaccaccccgacacggttgcattagtctttgcccttttgcgcaag
catgcccggctctcggctgcgtccgacatccagttgcgtgaaggctcggacgttggccgt
gtgctggcgaggttgaatccccaggctgacccgcaacacgtcaccacggtgctggtaagg
cgtgaaggcgtcttcaagtgctacgacctgcaagggcgcgagcagaatgtgcacctggat
gaccctgaagacctgaccgaggtgctggccaggcatttggcccgggatgatcttgcgcgc
ctgacatgggacggtgcgcaggcccgtgcacaaatggccaatgcactgcgcagctggttg
cctgccacccgcgaggcacagcttgagttgatgggctggcgcgcgatcgacgtgccgcac
aaccctttgcgtcggctgcccgatggccgctttggctatctgctcaacggacgtgatggc
ctacgcgagcccctgcgtcgtgacctttacgaagcggtgggcacgttgtacccgtcactc
gatgcgcaagagctggaggagtacgtgacgctcctgctgcaacgacctgagtcggcgtac
gctgtcatcattgcgcagtatcgcgagtatctggcgcttgatcaggcgttggacgactgg
atgagagacgccccgcaaggccgcttgcgcgaggtgcgccgacaggcggccgacacgttc
cgtcgctgttggcgtttgcaagtacccgatgggcaggctgaggctgcacatcaggcagtc
aaccgtttcagcctggttggcgcagatattggtaacctgccagttctgcccgaggggacg
aacttcatgcatgtcaccgaactggttttggcagggttgcgaatcgagtctttgccgcgg
ggcttcctgcattgtttcagccgcttacgtcgccttgatctcttcgataaccagctgacc
gagctacctgtcggtattgatgatttgccgcaactgaccagcctggggttgtcgcacaac
cgccttaacttgaccgaagcaagcgtccgtaccttgggcagcatggttctgttgcaagag
ctgaacttgagcttcaacccgttgggtgcaataagccttcggctcgctggtttatcccac
ttgcgtgtgctgagcttgcgtcgggccaacttgacggcagtgccagtgggcgtggtgcgc
agcgggcgactggaaatcgtggacctgcgcgacaatcagatctcccaattacctgaagcg
ttgttccgggcgccgttgcagttacgtcgggcgctgttgcttgacaacaacgcgctgcct
gtcgccgaccgtgaccgtctggtggcacctgaccccatgcggctgccggtgctgccgccc
acagaccccttcatgcagtcgcggcaacgctggttggcattcgtggagcccgctgcaatg
gcggccagcactcgacactgggatacgcttagggcctacgagcgcagcgacgagttcttc
cggttactcaccttgctgagtgaaaccagcgattaccggcagcagccgcagagcctggca
tccagggtgtggtccatgatcgaggccgccaacggcgacagcagtttgcgtaccgacctg
ttcgaactggctgctgcgcgaggctgcgtggaccggatgatctcgtgtttcagccgcctg
gaggtccgggtgatgctggctcaggccatgcgcgcagggggcgaggcgggtgaggaacag
gctttgctcgagctggctacggggttgttccggctggagcgggtggaggccatcgcacag
gccgaaatcgagcgccagaccacactggaggccgacttgctgcgcagtcgaggctacacc
caggcgcaggcggacacgcaagcgtctgagcgtgtggacgccatcgaggtgaacctggct
tacagagtagggttggcacgaacgctgaaactccccggtcaacccaaaaccatgcaattc
cagccgttggccaaaatcaaccagcagcggcttgccaacgcggcggcctcggtcagatgg
gcgtccagaaccgaggcgctggtggcgttcgtcagccagcgggacttctgggtggcctac
ctggaacgtcgtcatgccgctaggttcgcggaggtcaaagcgcctttctgggaccggctg
gaggaggccaccgatgaaagcgccgccgcgcaggtccagcgcgaatttgatgaggcggta
cgcaggctggttgtgcaactgacgcgcgcagcactgggcaatcaccccgaagcgctttga
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