KEGG   Pseudomonas kurunegalensis: QQ992_10140
Entry
QQ992_10140       CDS       T09327                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K11917  sigma-54 dependent transcriptional regulator
Organism
pkk  Pseudomonas kurunegalensis
Brite
KEGG Orthology (KO) [BR:pkk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pkk03000]
    QQ992_10140
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pkk02044]
    QQ992_10140
Transcription factors [BR:pkk03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    QQ992_10140
Secretion system [BR:pkk02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   QQ992_10140
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 AAA_5 Mg_chelatase HTH_30 AAA_16 AAA_2 AAA_19 AAA HTH_8 AAA_22 Sigma70_r4
Other DBs
NCBI-ProteinID: WJD64626
LinkDB
Position
2254199..2255257
AA seq 352 aa
MSLITHPNARELTKSVRATVLVFKDPRSQELLSRIERLAPSEANTLIIGETGTGKELVAR
HIHHLSRRGREPFVAVNCGAFAETLVESELFGHEKGAFTGATSNKAGWFEAANGGTLFLD
EIGDLPLNMQVKLLRVLQEREVVRLGSRTPIPINVRLVAATNVNLADAVVAGHFREDLFY
RLHVATIRLPPLRERPGDILPLAEFFIEEHCRRLGYERASLSPDAERKLLAHSWPGNIRE
LENAIHHALLVCRYQVVAPADLHLVDMRPQVAVAVAHAHLPAVGVAPPDLESALLALFEQ
NVPNLYEHIEETVFRAAYRYCHGNQLQTGRLLNISRNIVRARLEKIGELSKA
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgtcgctgatcacccaccccaatgcccgcgagctgaccaagtcggtacgtgccaccgtg
ctcgtgttcaaggacccgcgctctcaagagctgctcagccgcatcgagcgcctggcgccc
agcgaggccaataccctgatcatcggcgaaaccggcaccggcaaggagctggtcgcccgc
cacatccatcacctcagccgccgtgggcgtgagccgttcgtagcggtgaactgcggcgcc
tttgccgaaaccctggtggagagcgagctgttcggccacgagaaaggcgcgtttaccggt
gccaccagcaacaaggccggctggttcgaggcggccaatggcggcacgctgttcctcgac
gaaatcggcgacctgccgttgaacatgcaggtgaagttgctgcgggtgctgcaggagcgt
gaagtggtgcggttgggctcacgtacgccgatacccatcaacgtgcggctggtggcggcg
accaacgtcaacctggccgatgcggtggtagcggggcattttcgggaagacttgttctac
cgactgcacgtggcgacgatccgcctgccgccgctgcgcgagcggccgggggacatcctg
cctttggcggagtttttcatcgaggagcattgccgacgcctgggttacgagcgtgcctcg
ctaagcccggatgccgagcgtaaattgctggcgcatagctggccgggcaacatccgcgag
ctggagaacgccattcaccacgcgttgctggtgtgccggtatcaggtggtggcaccggcg
gacttgcacctggtcgacatgaggccacaggtagcggtggccgttgcgcatgctcatttg
cctgctgtcggcgtggccccgcccgacttggagagcgcgttgctggccttgttcgagcag
aatgtgccaaacctgtatgagcatatcgaggagacggtgttccgggcggcttaccgctat
tgccacggtaaccagttgcagacggggcggttgctgaacatcagccgcaatatcgtgcgg
gcgcggctggagaagataggcgaattgtcgaaggcgtga

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