Pseudomonas kurunegalensis: QQ992_11965
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Entry
QQ992_11965 CDS
T09327
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pkk
Pseudomonas kurunegalensis
Brite
KEGG Orthology (KO) [BR:
pkk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkk03000
]
QQ992_11965
Transcription factors [BR:
pkk03000
]
Prokaryotic type
Helix-turn-helix
Other families
QQ992_11965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
AAA_lid_14
PAS_4
AAA_5
PAS_9
HTH_30
PAS
AAA_2
HTH_1
HTH_7
HTH_28
HTH_29
HTH_22
AAA
HTH_20
HTH_23
Mga
AAA_16
HTH_50
HTH_11
AAA_7
HTH_17
PAS_8
AAA_22
Diguanyl_cycl_sensor
Sec7
Motif
Other DBs
NCBI-ProteinID:
WJD64981
LinkDB
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Position
2671465..2673375
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AA seq
636 aa
AA seq
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MARQLITNAQDPLHESRQARLKLASEGELPLGMLRDEIDASWRRSLGHGLDCLQGEQVGL
GLEQGHDLRMLLERNRLLVDAVTPELDYLVARQGKSGIVILGDAKANVLAIEGQTHVLGR
EGLRDLHPGSCWSESLRGTNAIGTAVVEGRPTLINCGEHYLDRLSPFSCTSVPLRDPRGE
VIGVLDITREGVMAQPQDSLTTLMLAAGNIESRMFGLCHPEQLVLAFHSRPQYLNSAWHG
LLALSLDGEVLAANDSACQLLQVPRHELIGRRSTELLGERSPAFIARLWQGGVSSVQTAK
GEFYFRALQLPRHGRVNGSAPASKPTLSKQSPALDALAGGDPRLARNLRMARQGLGNGLP
VLLLGETGTGKEVVARALHQASPRADKPFVAVNCAAIPEGLIESELFGYREGAFTGSRRG
GMVGRLMQAHGGTLFLDEIGDMPLALQARLLRVLQERRVAPLGAGDEQDIDVALICATHR
DLKRLVQEQHFREDLYYRVNGVSLRLPALRERDDLAAIIQGLLDKADVRGVTLDPALTTL
LEGFDWPGNIRQLEMVIRTALAMREDGEQVLTLDHLTDCLLDELASGTAPSGSLKDNELE
LIRGALARHQGNVSAAAEALGISRATLYRKLKQLRG
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgacaactcataacaaacgcccaagacccgctgcacgaatcccgacaggcccgc
ctgaagctggccagcgaaggcgagctgccgttgggcatgctgcgcgacgaaatcgacgcc
tcctggcggcgcagcctgggccatggcctggattgcctgcaaggcgagcaggttggcctg
ggcctggagcagggccatgacctgcgcatgctgctggagcgcaaccggctgctggtcgac
gccgttacccccgaactggactacctggtcgctcgtcagggcaagtcgggcatcgtcatc
cttggcgacgccaaggccaatgtgctggccatcgaaggccagacccacgtgctcggccgc
gagggcctgcgcgacctgcacccgggcagttgctggagcgagtcgctgcgcggcaccaat
gccatcggcacggccgtggttgaaggccggcccacgctgatcaactgtggcgaacactac
ctcgaccgcctcagcccgttctcctgcacgtccgtgcccctgcgtgacccgcgtggcgaa
gtgatcggtgtgctcgatatcacccgcgaaggggtaatggcgcaaccgcaggacagcctg
accacgctgatgctggccgccggcaacatcgaaagccgcatgttcggcctgtgccacccc
gagcaactggtactggccttccacagccgaccgcaatacctcaatagcgcttggcacggc
ctgctggcgctgagcctggacggtgaagtgctggcggccaacgacagtgcctgccagttg
ttgcaggtgccgcgccatgagctgattggccggcgcagcactgaattgctcggcgagcgt
tcacctgcatttattgcgcgcctgtggcagggtggcgtgagcagtgtgcagacggccaag
ggcgagttctacttccgtgccctgcagctgccgcgccatggtcgggtcaatggcagcgcg
ccggccagcaagccgacgctgagcaagcagtcgccggcgctcgacgccctggccggtggc
gacccacggctggcgcgcaatctgcgcatggcccggcaggggctgggcaatggcctgccg
gtattgctgctgggcgagaccggtaccggcaaggaagtggtcgcccgggctctgcaccaa
gccagcccgcgggccgacaaaccgtttgtggccgtcaactgcgcagccatccccgaaggc
ttgatcgagtccgagctgttcggctatcgcgagggcgcgttcacgggatcgcgccgaggc
ggcatggtcgggcggctgatgcaggcccatggtggcacgctgttccttgacgaaatcggc
gacatgccgctggccttgcaagcacgcctgctgcgggtattgcaggagcggcgggtggcg
ccgttgggggcgggcgacgaacaggacatcgatgtggcgctgatttgcgcgacccaccgc
gacctcaaacgccttgtgcaagagcagcactttcgcgaagacctgtactaccgggtcaac
ggtgtgtcgctgcgcttgccggcgctgcgcgagcgtgatgatctggccgcgatcatccag
ggcctgctggacaaggccgatgttcgtggcgtgaccctcgacccggcgttgactacattg
cttgaaggcttcgactggccgggcaacatccgccaactggaaatggtaatacgcacggcg
ctggccatgcgcgaggacggcgagcaggtgttgactctggaccacctcactgactgcctg
ctggacgaactggccagcggtacggcgccctctggcagcctcaaggacaacgaactggaa
ttgattcgcggtgcgctggcgcgccatcagggtaacgtgtcggccgccgccgaggccctg
ggcatcagccgggcaacgttgtaccgcaagctcaaacagttgcgcggctga
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