Pseudomonas kurunegalensis: QQ992_17885
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Entry
QQ992_17885 CDS
T09327
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pkk
Pseudomonas kurunegalensis
Brite
KEGG Orthology (KO) [BR:
pkk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkk03032
]
QQ992_17885
03400 DNA repair and recombination proteins [BR:
pkk03400
]
QQ992_17885
Enzymes [BR:
pkk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QQ992_17885
DNA replication proteins [BR:
pkk03032
]
Prokaryotic type
DNA Topoisomerases
QQ992_17885
DNA repair and recombination proteins [BR:
pkk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QQ992_17885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Metal_resist
Motif
Other DBs
NCBI-ProteinID:
WJD60804
LinkDB
All DBs
Position
3935691..3936713
Genome browser
AA seq
340 aa
AA seq
DB search
MLDCPLPRTLHYVDDSQPGLTRRRWRDRFIYLDTDGQRVRDSETLARIASLVIPPAYTDV
WICTDPQGHLQATGRDARGRKQYRYHTQWRELRDQHKYGRMLAFAQALPELRAQLESHLA
RPGLDREKVMALVVSLLDHTLIRIGNQRYLRDNQSYGLTTLRNRHVQVKGSTIRFQFRGK
RGVEHNVTLNDRRLASLLKRCMELPGQALFQYLDEDGQRHSVGSSEVNQFLQQLTGADFT
AKDYRTWAGSSLALDLLKPLAWEPDTEAKRQVAAAVRQVAKRLGNTPAVCRRCYIHPAVL
EHYALGRLANLPKSRVRKGLDPEEVALLIFLQALEEQDDH
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctcgactgccccctgccacgcaccctgcactacgttgacgacagccagccgggcctg
acccggcgacgctggcgcgaccgtttcatctatctggataccgatggccaacgggtgcgc
gacagcgaaaccctcgcccgtatcgcttcactggtgattccgccggcctacacggatgtg
tggatatgcaccgacccacagggccacctgcaagcaaccggccgcgacgcgcgtggccgc
aagcagtaccgctaccacacgcagtggcgcgagctgcgcgaccagcacaagtatgggcgt
atgctggcctttgcccaggccctgcctgaactgcgcgcacaactggagagccacctggca
cggccaggcctggaccgggaaaaagtgatggcgctggtagtgagcctgctcgaccacacc
ctgatccgcatcggtaatcaacgctacctgcgcgacaaccagtcgtatggcctgaccacc
ctgcgcaaccgtcatgtgcaggtcaaaggcagcaccatccgcttccagttccgcggcaag
cgcggcgtggagcacaacgtcaccctcaacgaccggcggcttgccagcctgctcaaacgc
tgcatggaactgcccggacaggcactgtttcaatacctggatgaggacggccagcgccac
agcgtcggctccagcgaggtcaaccagtttctgcagcagctgaccggcgccgatttcacc
gccaaggactaccgcacctgggccggcagcagcctggccctggacctgctgaagcccttg
gcctgggagccggacaccgaggccaaacgccaggtcgccgcagcagtgcgccaggtcgcc
aaacgccttggcaatacgcccgcagtgtgcaggcgttgttatatccaccccgccgtactt
gagcactatgccctggggcgcctggccaacttgccgaaaagccgggtgcgcaaagggctg
gaccccgaagaagtggcattgctgatatttctgcaggcacttgaggaacaggatgaccat
taa
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