Pseudomonas kurunegalensis: QQ992_20765
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Entry
QQ992_20765 CDS
T09327
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pkk
Pseudomonas kurunegalensis
Pathway
pkk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pkk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QQ992_20765 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkk03019
]
QQ992_20765 (recQ)
03400 DNA repair and recombination proteins [BR:
pkk03400
]
QQ992_20765 (recQ)
Enzymes [BR:
pkk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QQ992_20765 (recQ)
Messenger RNA biogenesis [BR:
pkk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QQ992_20765 (recQ)
DNA repair and recombination proteins [BR:
pkk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QQ992_20765 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Sigma70_r4_2
HTH_23
HTH_40
GerE
HTH_29
ResIII
Glyco_hydro_57
Motif
Other DBs
NCBI-ProteinID:
WJD61350
LinkDB
All DBs
Position
complement(4562056..4564203)
Genome browser
AA seq
715 aa
AA seq
DB search
MLEQAQRVLKDIFGYDSFRGRQAAIIECVANGGDALVLMPTGGGKSLCFQVPGLLRPGLT
VVVSPLIALMDDQVATLDELGVAAAALNSTLTPEQQRDLAGRLRRGEVKMLYLAPERLVQ
PRMLDFLRDLDISLFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPHVPRIALTATADMRT
REEIVQRLHLQGAERFLSSFDRPNIFYRIVPKEAPRKQLMAFLGERRGNAGIVYCLSRKK
VDETAAFLCDQGFPALPYHAGLAAETRAANQHRFLNEEGLIMVATIAFGMGIDKPNVRFV
AHLDLPKSLEAYYQETGRAGRDGLPSDAWMAYGLQDMVMLKQMLQNSEGDERHKRIEQHK
LDAMLALCEETRCRRQSLLAYFDETLEQPCGHCDNCVDKIQTWDATEPARQALSAVFRTG
QRYGVGHLVDVLLGKDTEKVRNFGHEKLSVFGVGKGLAEVEWRSLFRQLVARGLVDIDLE
GYGGLRLSDSCRPLLRGEVTLQLRRDLKPQTTAKASSSSGGSPASQLVRAEERELWEALR
TLRRKLAEEHSVPPYVIFPDSTLLEMLRSQPVSLSDMAQVSGVGARKLERYGQAFLEVLN
NSGGTDEAPKVVLDLRHELVSLARAGMTPAQIAGQLNCSEKNVYSLLAEALGRQELSLDQ
ALDLPEDLLMEVQDAFLDGEGELPAVSAIAPLFGARVPEGVLYCVRAALAAEFEL
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaacaggctcagcgcgttctcaaggatatcttcggctacgacagtttccgaggg
cgccaggcagcaatcatcgaatgcgtggccaacggcggcgatgccttggtgctgatgccc
accggcggcggcaagtcgttgtgcttccaggtaccggggctgctgcgcccaggcctgacg
gtggtggtttcgccactgatcgcgttgatggatgaccaggttgccacccttgacgagctg
ggcgtggcggcggctgcgttgaactccacgctgacgcctgagcagcagcgtgacctggcc
gggcgcctgcgccgtggcgaagtgaagatgctgtacctggcgccggagcgcctggtgcag
ccgcgcatgctcgacttcctgcgcgacctggacatttcgctgttcgccattgacgaagcc
cactgcgtctcgcaatggggccacgacttccgccccgaatacctgcaactgggccagttg
gccgagctgttcccgcatgtgccgcgtattgcgctcaccgccaccgccgacatgcgaacc
cgcgaggaaatcgtccagcgcctgcacctgcaaggcgccgagcgcttcctgtcgagcttc
gaccggcccaacattttctaccgcatcgtgcccaaggaagcgccgcgcaagcagctgatg
gccttcctcggcgagcgccgtggcaacgcaggcatcgtctactgcctgtcgcgcaagaag
gtcgacgaaaccgccgccttcctctgtgaccaaggcttcccggcattgccgtaccacgct
ggcctggctgccgagacgcgcgcggccaaccagcaccgcttcctcaacgaggaagggctg
atcatggtcgccaccattgcgtttggcatgggcatcgacaagcccaacgtgcgcttcgtt
gcccacctcgacctgcccaagtcgcttgaggcctattaccaggaaaccggccgtgccggc
cgtgacggcctgccctccgatgcctggatggcctacggcctgcaggacatggtgatgctc
aagcagatgctgcagaactccgaaggtgacgagcgccacaaacgcatcgagcagcacaag
ctcgatgccatgctggcgctgtgcgaggaaacccgctgccgccgccagtctctgttggcc
tatttcgacgaaaccctcgaacagccctgcgggcattgcgacaactgtgtcgacaagatc
cagacctgggacgccacagagccggcccgccaggccctgtcggcggtgttccgcacgggc
cagcgctatggcgtcggccacctggtcgatgtgttgctgggcaaggacaccgagaaggta
cgcaatttcggccacgagaagctgtcggttttcggcgtcggcaagggcctggccgaggtc
gagtggcgttcgctgttccgccagctggtggcgcgcggcctggttgatatcgacctggag
ggctatggcggcttgcgcttgtccgacagctgccggccgctgctgcgtggcgaggtcacc
ctgcaattgcgccgcgacctcaagccgcagaccacggccaaggcttcgtcgtccagcggc
ggcagcccggccagccagctggtgcgtgccgaagagcgcgagctgtgggaagcgctgcgt
accttgcggcgcaagctggcggaggagcacagcgtgccaccctacgtcatcttccccgac
tcgacgttgctggaaatgctgcgcagccagcctgtcagcctcagcgacatggcccaggtc
agcggcgtgggtgcgcgcaagctggagcgctatggccaggcgttcctcgaagtgctgaac
aacagtggtggcaccgacgaggcgccgaaagtggtgctcgacctgcgccacgagttggtc
agcctggcgcgcgccggcatgacgccggcgcagatcgccgggcagctcaactgcagcgag
aagaacgtgtatagcctgctggccgaggcactgggccgccaggaactgagcctggaccag
gccctcgacctgccggaagacctgctgatggaagtgcaggacgccttcctggatggcgaa
ggcgagctgccagcggtgtcggccattgcgccgttgttcggcgctcgggtgccggagggc
gtgctgtattgcgtgcgcgcagcgttggcggcggagttcgagctgtaa
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integrated database retrieval system
