Pseudomonas kurunegalensis: QQ992_20850
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Entry
QQ992_20850 CDS
T09327
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pkk
Pseudomonas kurunegalensis
Brite
KEGG Orthology (KO) [BR:
pkk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pkk03009
]
QQ992_20850
Enzymes [BR:
pkk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QQ992_20850
Ribosome biogenesis [BR:
pkk03009
]
Prokaryotic type
rRNA helicases
QQ992_20850
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WJD61367
LinkDB
All DBs
Position
complement(4578336..4579697)
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AA seq
453 aa
AA seq
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MQLNFPHLPEVTSVFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTG
SGKTAAFVLPLLNRLVDLKGGRVEIRSLILLPTRELAQQTLKQVQLFSQFTYIKAGLVTG
GEDFKEQAAMLRKVPDVLIGTPGRLLEHLNAGNLDLSHVQVMILDEADRMLDMGFAEDME
RLCKECENREQTLLFSATTGGAALRDIIGKVLKDPEHLMLNSVSQLAEGTRQQIITADHD
QHKEAIVQWLLANETFDKAIIFTNTRALADRIYGHLVAKDVKAFVLHGEKDQKDRKLAIE
RFKQGSSKVLVATDVAARGLDIDGLDLVINFDMPRSGDEYVHRVGRTGRAGGEGLAISLI
THNDWNLMSSIERYLKQQFERRVIKEVKGTYSGPKKVKASGKAVGAKKKKVDKKGGDKKA
AAKRKPTAKPRPNAPLASADGLAPLKKRKPATE
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgaatttcccgcacttgcccgaggttacctccgtgttctcccaattcgccctg
catgaacgcctgcttaaagccgtggccgagcttaaatttgtcgagccaactccggtgcag
gccgcggccatccccctggccctgcaagggcgtgacctgcgcgtgactgcgcagaccggt
agcggtaaaacggctgccttcgtgctgccgctgctcaaccgcctggtcgacctgaaaggt
ggacgggtagagatccgctcgctgatcctgctgccgacccgtgagctggcccagcagacc
ctcaagcaagtgcagctgttctcgcagttcacctacatcaaggcgggcctggtcaccggc
ggtgaagacttcaaggaacaggccgccatgctgcgcaaggtgccggacgtgctgatcggt
accccgggccgcctgctcgagcatctcaatgccggcaacctcgacctgtcccacgtgcaa
gtgatgatcctcgacgaagccgaccgcatgctcgacatgggcttcgccgaagacatggag
cgcctgtgcaaggagtgcgagaaccgcgagcaaaccctgctgttctcggccaccaccggt
ggcgcggccctgcgcgacatcatcggcaaggtgctgaaagaccctgagcacctgatgctc
aacagcgtgtcgcagctggccgaaggcacccgccagcaaatcatcaccgccgaccacgac
cagcacaaagaggcgatcgtgcagtggctgctggccaacgaaaccttcgacaaggcgatc
atcttcaccaacacccgcgccctggccgaccgtatctacggccacctggtagccaaggac
gtgaaggcgttcgtgctgcacggcgaaaaggaccagaaggaccgcaagctggccatcgag
cgcttcaagcaaggcagctccaaggtgctggtggccaccgacgtcgcagcccgtggcctg
gacatcgacggcctggacctggtgatcaacttcgacatgccacgcagcggtgatgaatac
gtgcaccgcgtgggccgtaccggccgcgctggtggcgaaggcctggcgatctcgctgatc
acccacaatgactggaacctgatgtcgagcatcgaacgctacctcaagcagcagttcgag
cgccgggtgatcaaggaagtgaagggtacttacagcgggccgaagaaggtcaaggcgtcg
ggcaaggctgttggggccaagaagaagaaggtcgacaagaagggcggcgacaagaaagct
gccgccaagcgcaagccgaccgccaaaccgcggccaaatgcaccgctggccagcgctgac
ggcctggcgccgctgaaaaagcgcaagccggctactgagtaa
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