Pseudomonas kurunegalensis: QQ992_23560
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Entry
QQ992_23560 CDS
T09327
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pkk
Pseudomonas kurunegalensis
Pathway
pkk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pkk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QQ992_23560 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkk03019
]
QQ992_23560 (rhlB)
Enzymes [BR:
pkk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QQ992_23560 (rhlB)
Messenger RNA biogenesis [BR:
pkk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QQ992_23560 (rhlB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
WJD61876
LinkDB
All DBs
Position
5149617..5151080
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AA seq
487 aa
AA seq
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MLKALKKIFGKGDAAPQAAAPAASVTPPAPAPAAEARPAPKPAAPRAKPAPKAEQPTAAM
PAADTPAKEKPRRERKPKPQASLWKPEDFVVEPQEGKTRFHDFKLSNELMHAIHDLGFPY
CTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISIISQLQQTPPPKERYMGEPRALIIA
PTRELVVQIAKDAIALTKYTGLNVMSFVGGMDFDKQLKALEARHCDILVATPGRLLDFNQ
RGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTDDVMNLAK
QWTTNPAIVEIEPENVASETVEQHVYAVAGSDKYKLLYNLVTQNKWERVMVFANRKDEVR
RIEEKLVRDGINAAQLSGDVPQHKRIRTLESFREGRITVLVATDVAGRGIHIDGISHVIN
FTLPEDPDDYVHRIGRTGRAGTSGVSISFAGEDDSYQLPAIEELLGRKIKCEMPPDELLK
PVPRKHH
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
gtgctcaaggcactcaagaaaatattcggcaagggagacgccgcgccacaggccgccgct
cctgctgccagtgtgacgccgcctgcgcccgcccctgctgcagaggcccggcccgcgccc
aaaccggccgccccacgcgccaaacctgccccaaaggccgaacagcccaccgccgctatg
ccagccgccgacaccccggccaaggaaaaaccacgtcgcgagcgcaagcccaagccgcag
gccagcctgtggaagccggaagacttcgtggtcgagccgcaggaaggcaaaacccgcttc
cacgacttcaagctgtccaacgagctgatgcacgccatccacgacctgggcttcccgtac
tgcacgccgatccaggcgcaggtgctgggttacaccctgcgtggccaggacgccatcggc
cgggcgcagaccggtaccggcaaaaccgccgcgttcctgatttcgatcatttcccagctg
cagcagacgccgccgcccaaagagcgttacatgggtgaaccgcgcgcgctgatcatcgcg
cccacccgcgagctcgtggtgcaaatcgccaaggacgccatcgccctgaccaagtacacc
ggtctgaacgtgatgagcttcgtcggcggcatggacttcgacaagcagctcaaggccctg
gaagcgcgccactgcgacattctggtcgccaccccgggtcgcctgctggacttcaaccag
cgcggcgaagtgcacctggacatggtcgaggtgatggtgctggacgaagccgaccgcatg
ctcgacatgggcttcatcccgcaggtacgccagatcattcgccagacgccgccgaaaagc
gagcgccagaccctgctgttctcggccaccttcaccgacgacgtgatgaacctggccaag
cagtggaccaccaacccggccatcgtcgagatcgagccggagaacgtggccagcgaaacg
gtcgagcagcacgtgtatgccgtggctggcagcgacaagtacaagctgctgtacaacctg
gtgacccagaacaaatgggaacgggtgatggtgtttgccaaccgcaaggacgaagtgcgg
cgcatcgaggaaaaactggtacgcgacggcatcaatgccgcccagctgtcgggcgacgtg
ccgcagcacaagcgcattcgtaccctggaaagcttccgcgaagggcgcattaccgtgttg
gtcgccaccgatgtggccgggcgtggtattcacattgatggcatcagccacgtgatcaac
ttcaccctgccggaagacccggatgactacgtgcaccgcattggccgcacagggcgtgcg
gggaccagcggcgtgtcgatcagctttgccggggaggatgactcctaccagctgccagcg
atcgaagaactgctggggcgcaagatcaagtgcgagatgccgccggatgagctgctgaag
ccggtgccgcgcaaacatcactga
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