Pseudomonas kurunegalensis: QQ992_24175
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Entry
QQ992_24175 CDS
T09327
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pkk
Pseudomonas kurunegalensis
Pathway
pkk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QQ992_24175 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkk03400
]
QQ992_24175 (recD)
Enzymes [BR:
pkk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QQ992_24175 (recD)
DNA repair and recombination proteins [BR:
pkk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QQ992_24175 (recD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
AAA_11
UvrD_C_2
Viral_helicase1
AAA_22
Helicase_RecD
SH3_13
UvrD-helicase
AAA_16
SLFN-g3_helicase
AAA_28
T2SSE
TraI_hel_assoc_N
AAA_17
nSTAND3
NTPase_1
AAA_5
Motif
Other DBs
NCBI-ProteinID:
WJD61997
LinkDB
All DBs
Position
complement(5274649..5276724)
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AA seq
691 aa
AA seq
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MSRSLVDLLPTPLHAEHLLALAPQHDSGDLLQLLDRWVERGWLRALDRAFVSFLEERAPG
SDPLLLLAAALASHQLGHGHVCLDLQQTLAEPDFALSLPPEGDALTGPLLLPSQLLANLD
LNAWRQRIAASSLVALGDNPGQQARPLVLSGERLYLRRYWRYERRIDHTLRQRLTQAEAP
LTDLSDRLTQLFAGGAPAGQVDWQKLACALATRAGFSIITGGPGTGKTTTVVRLLALLQG
PAVELGRPLRIRLAAPTGKAAARLTESIGQQVERLHVSAEVRGQIPTDVSTVHRLLGSRP
GSRHFRHHAGNPLPLDVLVVDEASMIDLEMMANLLDALPPRARLVLLGDKDQLASVEAGA
VLGDLCRDAEEGYYSPATTAWLEQVSGESLAGSGLKAGDEQRNPLAQQVVMLRFSRRFGE
GSGIGQLARLVNRQDAYAARNLLATPPDDVHSLALKHEQDRAFDRLLLDGLNRGAEGPQG
YRSYLRTLGRYRPALETAFDDPAWEQWAGKVLHSFEDFQLLCAVRRGAWGVEGLNERVAR
VLHNAGLIDSQQPWYEGRPVLVTRNDYGLGLMNGDIGIALRLPDEQGEPLLRVAFPRNDG
SGGVRFVLPSRLNEVETVFAMTVHKSQGSEFSHTALVLPDALNPVLTKELVYTGITRAKH
CFSLVEPRQGIFEEAVARKVRRISGLMLEQV
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgagccgaagcctagtcgaccttttgcccaccccattgcacgccgagcacctgttggcg
ctggcacctcagcatgacagtggtgacctgctgcaactgctcgaccgctgggtagagcgg
ggctggctgcgcgccctggaccgcgcattcgtgtcgttccttgaagagcgcgcccctggc
agtgaccccttgctgttgctggcggcagcgttggccagccaccaactgggccatggccat
gtgtgcctcgacttgcagcaaaccctggccgagcccgactttgcactgtcgctgccaccg
gaaggcgacgccttgactggccctctgctgttaccctcgcaactgctggccaacctcgac
ttgaatgcctggcgccagcgcatcgccgccagctcgctggtggcacttggcgataaccca
ggccagcaagcgcggccgctggtgctcagcggcgagcgcctgtacctgcgccgttactgg
cgctacgagcggcgcatcgaccataccctgcgccagcgcctgacccaggccgaagcgccg
ctgaccgacctgtcagatcgcctgacacagctgttcgcgggcggggcgccagcaggccag
gtggactggcagaagcttgcgtgtgcgctggccacccgtgccggtttcagcatcatcacg
ggcggccccggcacgggtaaaaccacgaccgtcgtgcgcctgctggccttgcttcagggg
ccggcggtagagctgggcaggccgctgcgcatacgcctggccgcgccgaccggcaaggct
gctgcgcgcctgaccgaatccattggccagcaagtcgagcggctgcacgtcagcgccgaa
gtccgcgggcaaattcccactgacgtcagcaccgtacaccggctgctcggcagccgccca
ggctcgcggcacttccgccaccatgctggcaacccgttgccgttggatgtgctggtggtc
gacgaggcgtcgatgatcgacctggaaatgatggccaacctgcttgatgccttaccgcca
cgggcacgcctggtgctgctgggggacaaggaccagttagcctctgtcgaggccggcgcg
gtgctgggggatttgtgccgggatgccgaggagggctattactcgccggcaaccaccgcg
tggctggagcaggtcagcggcgagtcgctggccggcagcgggctcaaggctggcgatgag
cagcgcaacccgctggcccagcaggtggtaatgctgcgtttttcacgacgcttcggcgaa
ggcagcggcattggtcaactggccaggctggtcaatcgccaggacgcttacgcggcacgc
aacctgctggccacgccaccggacgacgtgcacagcctggcgctcaagcacgagcaagac
cgtgcttttgaccgcctgctgctcgacggcctgaaccgtggtgccgaaggcccgcaaggc
tatcgcagctacctgcgcacccttggccgctacaggccggcactcgaaaccgcatttgac
gacccggcatgggagcagtgggcgggcaaggtgctgcacagcttcgaggacttccagttg
ctctgcgcggtgcgtcgcggcgcctggggtgtcgaaggcctcaacgagcgggtggcgcgg
gtgctgcacaatgccgggctgatcgacagccagcagccctggtacgaagggcgcccggtg
ctggtgacccgcaatgactacggcctgggcctgatgaacggtgacatcggcatcgccctg
cgcctgccggatgagcaaggcgagccgctgctgcgcgtggcgttcccgcgtaacgatggc
agcggcggggtgcgcttcgtcctgccgagccggcttaacgaagtggaaacggtgttcgcc
atgaccgtgcacaagtcccagggctcggagttcagccacaccgcactggtgttgccggat
gcgctcaacccggtgctgaccaaggagctggtgtataccggcattacccgtgccaagcac
tgcttcagcctggtcgagccacgccagggcattttcgaagaagcggtggcgcgcaaggta
cggcgtatttccgggttgatgctggagcaggtctag
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