Pseudomonas kurunegalensis: QQ992_24180
Help
Entry
QQ992_24180 CDS
T09327
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pkk
Pseudomonas kurunegalensis
Pathway
pkk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QQ992_24180 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkk03400
]
QQ992_24180 (recB)
Enzymes [BR:
pkk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QQ992_24180 (recB)
DNA repair and recombination proteins [BR:
pkk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QQ992_24180 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
WJD61998
LinkDB
All DBs
Position
complement(5276721..5280395)
Genome browser
AA seq
1224 aa
AA seq
DB search
MTQARPLALSFPLHGSQLIEASAGTGKTFTISALYLRLILGHGGEQGFDRELLPPQILVV
TFTDAATKELRERIRARLAEAARFFRGELEGADPLLHQLRDDYPQEAWPRCAGRLEIAVQ
WMDEAAVSTIHGWCQRMLREHAFDSGSLFTQTLETDHSELLGQVMRDYWRRFCYGMRGDA
LAWVRSNWGSPDALLPRIRPLFGRIRAQHDGPEPAALIQASLQQRGQQLARLKAPWAQWA
EELRQICRDALAAKQVDGRKMQARYFEPWFDKLCAWAADEQRVELDLGTGFTRLTPAGMA
EAWKGKPPEHPALDAMQTLQQQLQALDNPDAPLLEHAAGWVSARFEVEKRRRAEMGFDDM
LVRLQHALASEAGERLASLIREQFPVALIDEFQDTDPVQYGIFERIYQISENRAQTGLFM
IGDPKQAIYAFRGADIYTYLAARRATSGRLHSLDTNYRSSKAMVAAVNQVFLQAEARETG
RGAFLFREADDNPLPFIEVHAKGRGEQLLIDGEASAALQCWQLESEEPVSSSVYRQQLAA
SCASHIVALLNGGQQGTAGFQNAEGELRPCLPSDIAILVRDGHEAQMVRAELAARDVRSV
YLSDKDSVFAAQEAHDLLAWLKACAEPDSERLLKAALASLTLGLSLAELDRLNQDERVWE
GWVMRFRLYRDTWQRQGVLPMLRHLLHDFHLPRTLIRRSDGERVLTNLLHLAELLQQAAG
ELDGEQALIRHLAEHLANSGQAGEEQILRLESDEQLVKVVTIHKSKGLEYPLVYLPFICT
SKPVDGTRLPLAWHDSDGNAHLTLTPNQEQIERADDERLAEDLRLLYVALTRAQHACWLG
VADLKRGNQKSSQLHRSAFGYLLGGGLALAGSTQLTDWLQALAATCPHITCPGLPQADEQ
VYRMPHAERELLPARKPRRAAAEHWWIASYSALRVGDQTLGADSSQAQQLLDDEVLDAQV
LREVPPDSGDIHRFPRGPNPGTFLHGLLEWAGREGFSLVTGNLQLIERTVGQRCNRRDWA
GWIPTLTQWLQRLLNEPLPLPGNDLSVTLGQLRHYQIEMEFWFASHQVDAEQLDRLVARH
THPGLARPAAQPTVLNGMFKGFIDLAFELDGQYYVTDYKSNWLGPDIQAYDTMAMEKSII
EHRYDLQYVLYLLALHRQLRARLPDYDYDRHVGGALFIFLRGASSSGHGVYHAKPPRELI
ERLDALFRGERAPAQQDLLAGVAP
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggcccgtcccttggcactgagtttccccctgcacggcagccagctgatcgag
gccagcgccggtacgggcaagaccttcaccatttcggcgctgtacctgcgcctgatcctc
ggccacggtggcgaacagggcttcgaccgtgagctgctaccaccgcagatcctcgtggtg
accttcaccgacgctgccaccaaagagctgcgcgagcgcattcgtgcccgcctggctgag
gctgcacggtttttccgtggtgaactggaaggcgccgacccgttgttgcatcaactgcgt
gacgattatccacaagaggcctggccgcgttgtgccggccgcctggaaatcgctgtgcag
tggatggacgaagcggcggtatcgaccatccatggctggtgccagcgcatgctccgcgag
catgccttcgacagtggcagcttgttcacccagaccctggaaaccgaccacagcgagctg
ctgggccaggtgatgcgcgattactggcggcgcttctgctacggcatgcgcggtgatgcg
ttggcctgggtccgcagcaactgggggagccccgatgccttgctgccgcgcattcgcccg
ctgtttggccgcatacgcgctcagcacgacgggccagagccagccgcattgatccaggcg
tcgctgcagcaacgtggccaacagctggcccggctaaaggcgccgtgggcgcagtgggcc
gaagagctgcgccaaatctgccgcgatgcactggccgccaagcaggtcgacggccgcaag
atgcaggcccgttacttcgaaccttggttcgacaaactttgcgcctgggctgccgatgag
caacgggtggagctcgacctgggtaccggcttcacccgcctcaccccggcgggcatggct
gaagcctggaagggcaaaccgcccgagcacccggccctcgacgccatgcagacgctgcaa
cagcaattgcaggccttggacaacccagatgcgccgttgcttgagcatgctgccggctgg
gtatcggcgcgattcgaagtggagaagcgccgccgtgcggaaatgggcttcgacgacatg
ctcgtgcgcctgcagcacgccctggccagcgaggccggtgagcgcctggccagcctgatt
cgcgagcagtttccggttgcgctgatcgacgaattccaggacaccgacccggtgcagtac
ggtattttcgagcgcatttaccagatcagcgaaaaccgtgcgcaaaccggcctgttcatg
atcggtgaccccaagcaggcgatttacgccttccggggtgccgacatttacacctacctt
gctgcgcggcgcgccaccagtggccgcctgcacagcctggacaccaactaccgctccagc
aaagccatggtcgcggcggtcaaccaggtgttcctgcaggccgaagcgcgtgaaacgggg
cggggtgcattcctgttccgcgaggccgatgacaacccgttgccgttcatcgaggtgcat
gccaagggccgtggcgaacagctgctgattgacggtgaagccagcgcagccctgcagtgc
tggcagctggaaagcgaagagccggtttccagcagcgtctaccgccagcaactggccgcc
agctgcgctagccatatcgtcgccttgctcaacggtggccagcagggcacggcgggcttt
cagaatgccgagggcgaattgcgcccctgcctgccttcggacatcgccatcctggtgcgt
gatggccatgaagcacagatggtccgcgccgagctggccgcacgtgatgtgcgcagcgtg
tacctgtccgacaaggattcggtgttcgccgcccaggaagcccacgacctgctggcctgg
ctcaaggcctgcgccgagccagactcggaacgcctgctcaaggccgcactggccagcctc
acactgggcctgtcgctggccgaactggaccggctgaaccaggacgagcgggtctgggaa
ggctgggtcatgcgttttcgcctttaccgcgacacctggcagcgccaaggggtgctaccg
atgttgcgccacctgctgcacgacttccacctgccgcgcacgctgattcgccgcagtgat
ggcgagcgggtgctgaccaacctgctgcacttggccgagctgttgcaacaggccgcaggc
gagctggacggtgagcaggcgttgatccgccacctggccgagcacctggccaattccggg
caggccggtgaagaacagatcctgcgcctggagagcgacgaacagctggtcaaggtggta
acgatccacaagtccaagggcctggaatatcccctggtctatctgccgttcatctgcacc
agcaaacccgtcgacggtacccgactgccgttggcctggcatgacagcgacggtaatgcc
cacctcacactcacgcctaaccaggagcagatcgagcgcgccgatgacgagcgcctggcc
gaagacctgcgcctgctctacgtagccctgacccgggcacagcatgcttgctggctgggt
gtggccgacctcaagcgtggcaaccagaagagttcgcagctgcaccgctcggcatttggc
tacctgctggggggcggccttgctctggccgggtcgacgcagttgacggactggttgcag
gcgctggcagcgacgtgtccgcacatcacctgcccgggtctgccgcaggcggatgagcag
gtgtatcgcatgccgcatgccgagcgtgagctgctgcccgcacgcaagcctcgccgcgca
gcagccgagcattggtggatcgcgtcgtacagcgccttgcgcgtcggcgaccagaccctc
ggcgccgacagctcgcaggcccagcaattgctggatgacgaggtgctcgatgcccaggtg
ttgcgcgaggtcccgcccgacagcggcgatatccaccgctttccacgggggccgaacccg
ggcaccttcctccatggcctgctggaatgggcagggcgcgagggcttcagcctcgtcacc
ggcaacttacagctgatcgagcgaaccgttggccagcgatgcaaccgccgtgactgggct
ggctggattccgacccttacccagtggctgcaacgcttgttgaacgagccgctgccgttg
ccgggcaacgacctgagcgtaacgctcggtcagttgcgccattaccagatcgaaatggag
ttctggttcgccagccaccaggtcgacgccgaacaactcgaccgcctggtcgctcgccac
acccaccctgggctggcacgcccggcagcgcagccaaccgtgctcaacggcatgttcaaa
ggcttcatcgacctggcgttcgagctggacgggcagtactacgtgaccgactacaagtcc
aactggctgggcccggacatccaggcctacgacacaatggccatggaaaagtccatcatc
gagcaccgctacgacctgcagtacgtgctgtacctgctggccctgcaccgccagctgcgc
gcacgcctgccggattacgattacgaccgccatgtcggtggcgccctgttcatcttcctg
cgaggcgccagcagcagcggccacggcgtgtaccacgccaagccaccgcgtgagctgatt
gaacgcctggatgcgctgttccgtggcgagcgcgcgcccgcacagcaggacctgttagcc
ggagtcgcgccatga
DBGET
integrated database retrieval system
