Pseudomonas kurunegalensis: QQ992_27150
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Entry
QQ992_27150 CDS
T09327
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pkk
Pseudomonas kurunegalensis
Pathway
pkk00300
Lysine biosynthesis
pkk00470
D-Amino acid metabolism
pkk01100
Metabolic pathways
pkk01110
Biosynthesis of secondary metabolites
pkk01120
Microbial metabolism in diverse environments
pkk01230
Biosynthesis of amino acids
Module
pkk_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pkk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QQ992_27150 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QQ992_27150 (dapF)
Enzymes [BR:
pkk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
QQ992_27150 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
SPO11_like
Motif
Other DBs
NCBI-ProteinID:
WJD62562
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Position
5963202..5964032
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRHTGIGFDQLLIVEAPNNPEVDF
RYRIFNADGSEVEQCGNGARCFARFVLDKRLTAKKRIRVETKSGIIVLDVQNDGQVSVDM
GPPRFIPAEIPFVADAQAQNYPLEVDGQLHSIAAVSMGNPHAVLRVDDVHTAPVHELGPK
IENHPRFPQRVNAGFIQVIDRHRANLRVWERGAGETQACGTGACAAAVAAISQGWMDSPV
SLDLPGGRLHIEWAGPGKPVLMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaagatgcatgggctgggcaacgacttcatggtcctcgacctg
gtcagccagcacgcgcacatccagcccaagcacgccaagcaatggggtgaccgccacacc
ggcatcggcttcgatcagttgctgatcgtcgaagcgccgaacaacccggaagtggacttc
cgctaccgcatcttcaacgccgacggctccgaagtagagcagtgcggcaatggtgcccgt
tgcttcgcccgtttcgtgctggacaagcgcctgaccgcgaaaaaacgcattcgggtggaa
accaagagcggcatcatcgtgctggacgtgcagaacgacggccaggtgagtgtcgacatg
ggcccaccgcgcttcatccctgccgaaatccccttcgtcgctgacgcgcaagcacagaac
tacccactggaagtcgacggccagctgcattcgattgccgccgtttccatgggtaacccg
catgccgtactgcgcgtcgacgacgtgcacactgcccccgtgcatgagctgggcccgaag
atcgaaaaccacccacgcttcccgcagcgggtgaatgccggcttcatccaggtcatcgac
cgccaccgcgccaacctgcgcgtgtgggagcgcggcgcgggcgaaacccaggcctgcggc
accggcgcctgcgccgcagccgtggcggcaatcagccaaggctggatggactccccggtg
tccctcgacctgcccggcggccgcctgcacatcgaatgggccggccccggcaagcccgtg
ctgatgaccggcccggccgtacgcgtctacgaaggacaggttcgtctctaa
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