Pseudomonas kurunegalensis: QQ992_27770
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Entry
QQ992_27770 CDS
T09327
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pkk
Pseudomonas kurunegalensis
Pathway
pkk03420
Nucleotide excision repair
pkk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pkk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QQ992_27770 (uvrD)
03430 Mismatch repair
QQ992_27770 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkk03400
]
QQ992_27770 (uvrD)
Enzymes [BR:
pkk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QQ992_27770 (uvrD)
DNA repair and recombination proteins [BR:
pkk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QQ992_27770 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
QQ992_27770 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_12
PcrA_UvrD_tudor
AAA_11
AAA_22
DUF6658
DUF5681
Motif
Other DBs
NCBI-ProteinID:
WJD62682
LinkDB
All DBs
Position
6095577..6097763
Genome browser
AA seq
728 aa
AA seq
DB search
MHTDDLSLLLNSLNDAQRQAVAATLGRQLVLAGAGSGKTRVLVHRIAWLIQVEQASPHSI
LSVTFTNKAAAEMRQRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEARLVQNFQILDSD
DQQRLIKRVMRELGLDEQKWPARQAQWFINGQKDEGLRPQHIQAGGDLFLATMRDVYTAY
EQACERAGVIDFSELLLRALDLWRDHPGLLEHYQRRFQHVLVDEFQDTNAVQYAWLRLLA
RGGASLMAVGDDDQSIYGWRGAKIENIHQYTADFPDAEMIRLEQNYRSTGGILKAANALI
ANNSGRLGKELWTDMGEGEPLTLYAAYNEHDEARYVVETIESLVKQGNARNEIAILYRSN
AQSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLIEGRGNDAALERVINVPPRG
IGEKTVEAIREHARHSQASMWDAMCQLLAAKALKGRAASALGAFIELIEGLAAKVVDMPL
HTMTQTTIEQSGLIIYHQEEKGEKGQARVENLEELVSAARNFESTDEDADLSPLSAFLGH
ASLEAGDAQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERR
LAYVGITRAMRQLVMTYAETRRLYGSETYNKVSRFVREIPAGLIQEVRLSNSVSRPFGGV
KTATNSNLFANASIPQTAFNLGQRVQHAVFGEGVILNFEGSGAQARVQVNFAEGSKWLML
GYAKLEAL
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcacacagacgacctctccctcctgctgaattccctcaacgatgcccaacgccaggcc
gtagcggccacgcttgggcgtcaactggtgcttgccggcgccggttccggtaaaacccgc
gtgctggtgcaccgcatcgcctggctgatccaggtggagcaggcatcgccgcactcgatc
ctgtcggtgaccttcaccaacaaggctgcagccgaaatgcgccagcggatcgagcaactg
ctggggatcaacccggcgggcatgtgggtcggcaccttccacggcctggcccatcgcttg
ctgcgggcccactggcaggaagcgcggctggtgcagaatttccagattctcgacagtgac
gaccagcagcgcctgatcaagcgggtgatgcgcgagttgggcctggacgaacagaaatgg
ccggcacgccaggcacagtggttcatcaacgggcagaaggacgaaggcctgcgcccgcag
catatccaggccggtggcgacctgttcctggcgaccatgcgtgacgtctataccgcctac
gaacaggcgtgtgagcgtgccggggtcatcgacttctccgagctgctgctgcgcgccctg
gacctgtggcgcgaccacccgggcctgcttgagcactaccagcggcgcttccagcatgtg
ctggtagacgagttccaggacaccaacgccgtgcagtacgcctggctgcgcctgctggcg
cgcgggggtgccagcctgatggcggtgggcgacgatgaccagtcgatctacggctggcgc
ggtgccaagatcgaaaacattcaccagtacaccgccgacttccccgacgccgaaatgatc
cgcctggagcagaactaccgctctaccggcggcatcctcaaggcggccaacgccctgatt
gccaacaacagcgggcgcctgggtaaagagctgtggaccgacatgggcgaaggcgaaccg
ctgaccctgtacgcggcctacaacgagcacgacgaagcgcgctacgtggtggaaaccatc
gagagcctggtaaagcagggcaatgcgcgcaacgaaatcgccatcctgtaccgctccaac
gcccagtcgcgcgtgctggaagaagccctgctgcgcgagcgcattccctaccgtatctat
ggcggccaacgcttcttcgaacgcgctgaaatcaagaacgccatggcttacctgcggctg
atcgaagggcgcggcaacgatgctgccctggagcgggtaatcaacgtgccgccacgcggc
attggcgagaaaaccgtcgaagccatccgcgagcacgcccgccacagccaggcatcgatg
tgggacgccatgtgccagctgctcgccgccaaggccctcaaaggccgcgccgccagtgcg
ctgggggctttcatcgagctgatcgaggggttggccgccaaggtcgtggacatgccgctg
cataccatgacccagaccaccatcgagcaatccgggctgatcatctatcaccaggaagaa
aaaggtgaaaagggccaggcacgggtagaaaaccttgaggaactggtcagcgcggcgcgc
aacttcgaatccaccgacgaagacgccgatctatcgccgctttcggccttcctcggccat
gcctcgctggaagccggcgatgcccaggccgacgagcacgaagacagcatccagctgatg
accctgcacagcgccaagggcctggagttcccctacgtgttcctggtgggcatggaagaa
ggcctgttcccgcacaagatgagcctggaagaacccggccgcctcgaagaggaacgccgc
ctggcctatgtgggaattacccgcgccatgcgccagctggtcatgacctacgctgaaaca
cgtcgcctgtatggcagcgagacctacaacaaggtgtcgcgtttcgtacgtgaaattccg
gcgggcctgatccaggaagtgcggctgtccaacagcgtcagccgcccgttcggtggggtc
aagacggccaccaacagcaacctgttcgccaatgccagcattccgcagaccgcgttcaac
ctgggccagcgtgtacaacatgcggtattcggggaaggcgtgatcctcaacttcgagggt
tccggcgcgcaggcgcgggtacaggtgaactttgccgaaggcagcaagtggctgatgctg
gggtatgccaagctcgaggccctgtag
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integrated database retrieval system
