Pipistrellus kuhlii (Kuhl's pipistrelle): 118702953
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Entry
118702953 CDS
T07682
Symbol
VCAN
Name
(RefSeq) versican core protein isoform X1
KO
K06793
versican core protein
Organism
pkl
Pipistrellus kuhlii (Kuhl's pipistrelle)
Pathway
pkl04514
Cell adhesion molecule (CAM) interaction
pkl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pkl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118702953 (VCAN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118702953 (VCAN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pkl00535
]
118702953 (VCAN)
00536 Glycosaminoglycan binding proteins [BR:
pkl00536
]
118702953 (VCAN)
04091 Lectins [BR:
pkl04091
]
118702953 (VCAN)
Proteoglycans [BR:
pkl00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
118702953 (VCAN)
Glycosaminoglycan binding proteins [BR:
pkl00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
118702953 (VCAN)
Lectins [BR:
pkl04091
]
C-Type lectins
Lecticans
118702953 (VCAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
EGF
V-set
hEGF
EGF_TEN
Sushi
EGF_2
EGF_3
Motif
Other DBs
NCBI-GeneID:
118702953
NCBI-ProteinID:
XP_036265424
LinkDB
All DBs
Position
Unknown
AA seq
3241 aa
AA seq
DB search
MLINIKSILWMCSTLIATHALRKVKMEKSPPVKGSLSGKVNLPCHFSTVPTLPPNYNSSE
FLRIKWSKIELDKSGKDLKETTVLVAQDGNIKIGQGYKGRVSVPTHPEDEGDASLTMAKL
LASDAGLYRCDVMYGIEDTQEAVPLTVDGVVFHYRAATSRYTLNFENAQQACLDVGAVIA
SPEELNAAYEDGFEQCDAGWLSDQTVRYPIRTPREGCYGDMMGKEGVRTYGFRSPHETYD
VYCYVDHLDGDVFHITAPNKFSYKEAEEECENQDARLATVGELHAAWRNGFDQCDYGWLM
DASVRHPVTVAKAQCGGGLLGVRTLYRFENQTGFPSPDSRFDAYCFKPKQNISETTTIDM
NILTETASHSLSKELQTVPDRTTPITPLPTDLPVITAKFPAVGNIASFEQKSTAQSPVVT
HRLATDPPTPPGRTISEIKEEVPQSTTATSRHATDSWNDIMEYMPTQESVTQIEQIEVGP
LVTAMEISKHIPSTGFSVTETPFVSTMEPKTEKKRVSTASELVTTTRYFTLGEAGDGGED
RTSTVRSGHSTLVFSQIPEVITVSKTSEDTTPSQLIPALRTGTYTNDEIQEKVTIDPFIG
KIEEEDFSEMTFSTASSEPLVETTKSFDSPTLTTAKLSVVPTGARDVEEDFTRTPIGLET
NGYQDTTQYDEGMTKVHSTHSTSSVEVVTVSKWSWDEDNITSESLESTEHAHSPKLPPAL
LTTIGVSRKDKETPGFTKDEGDEFNLVPDSTQMPLEKFTEEESTDRGKFTIRFQPTTSTG
ITEKSTAEERVPPVTSMEDRAAHATVEGSALAKAEDMDVSEPVSTAPQFAHTSDMEGSTF
VHYSSTQESTYVSTSHTVLLSVSPKAEWGVLVPSVPSEGEVLGEPSQDIRAIDQTHLEAT
ISPKTIRTTTEIAQRTTREEFPWEDQTSEKPVPALGSAAGTAKEAAPPLDKHESDGSAYT
AAEDRWVTSSERVPILETTPIGKVEYTLSYLPGADTEHKAKTDEVVRLTPSMGPTVFLSP
GVEQKYETEEEATTEERDYIELGSELFEKPKVTALPEFSTIKATVPSEMTTAFSSVDRLH
TTSAVKPSSAPTEEPPLIDREPGAETTGGMVILAESTARVPTTTLEDKETETDIDREYFT
TSSPPSVTQPARPPTVEGKEALGPQALSTPEPPTGTKFHSDINIYIIEVRENKTGRMSDL
SVIGHPIDSESKEDEPCSEETDSEHDLIAAILPELIDIDIYHSEEDEEEDEDCANATDVT
TTPSVQYINGKHLVTTVPKDPEAAEARRGQFESVAPSQNFSDSSESDTPEFPMSERESSI
AVQPSEFKETTESLEMTWKPETYPETPEHFSSGEPDIFPTVPSSHKGQATEGPESVSDKG
PEPEHYSLVLEHTEPGSLSSEESSGDAEVSQESSEMIFSRTMEVTLGEEAEKSTSTTYIP
STVPSSMSANVLEEVSVTLTGNHRPVDPLATMENWVETTPGKIVELSGNPSILIPEGSGE
EEDKDKMFTVVTHSSQRNTTSTLVTLDTGKTMTTDNFFGVPATAIYLVSEQPSTEVVPTK
LVQETDTIEWAFSTSLEGKQRKGEEEGTTASTVQLHMPTQRSDQLVLSSALENTNEATSS
DSASATRNSVMYLTTSTQSEREMTSSNSFFPETDVLDNLGTQTTKTSSSSQPGVQEGQAT
VSGSPGSLSMEQGSREAATDPATTVPSFSLKVEPEIQVKKEIASTMSPLVETVLPFEPPG
LDLSNVTDREVIEVISQTSKESLMSEVSVESNHGTEIKGFSTDFPLEEDFSGDFREYSTV
SKIVTKEETVMMEGSGDAVFKDTQVSPSLIPTSGHINHTADPEGPGGSFVSTSAFPWEEF
TASGEGSGEQVVSASSSADQVFPSAVGNVFGTESPFVDQVLGEEGTTQEADKRATSLPTA
EAEGTEALTEKGDVKVDGTVSVDFSQMIEPTKLWSRQGVTTIGQEIEIKTTSEEKIQEQK
YFESPQSSVAPEQTIFYETGFPTTDYSILTTKKTYDADEEMEKEGISVVDMSTRDPGVKD
VEPYTTLPEVTEKSHFFLATTSVTESILDGSIVTDSLIKEKENIKPFPKVMKPVIKESDT
NLFSGLGSGEEVLPTTVSMNFTEMEQIISTLYPKASQVDSLETSISSDPTEDYEGMENVA
SEIGLLISKTDHISEYSETASSTTLLEILRDTRTEGPSLATLTFSADTEQPQNQTQSWEE
EIQTSQPQPTTEQISNKNSSVAETRETATSSTDFLARTSGIGMARGSVTPTTKPSDLFHE
YSGEGSGELDIVDLVHTSGTTQATRKGSTTFVPNRPLEKHPEDPSAKTITVDGFPTGSMV
PPLHLEQNESSPDPTIIVSNTVSYKRSTESADSFHHHLGGFEDSTLKPDRKKATENIIID
LDKEDKDLLLTITESTILEILPELTSDKNTIIDIDHTKPMYEDILGMQTDIDPETPSGLQ
VNNEDSAQTQQKHEAAANLSLTVEPFESSGDALLASYTQVAHNESMTSEDRSQFNHMGFI
FTTGIPIPSTETELDIFLPTATSLPIPSKSATVGPNIEELNTEVKALEDIFESSTLSDGQ
AIADQSEVISTSGHLERTQEEYEEKKYVGPSFQPELSSGAGEALIDSTPHVSIGTVHLTS
QSLTEASHVVEGSNPPDYTDTTSAVLAFVKLSPETSSPFTVPLGSGASEHTESPQSSALP
SVDPGTSQMSPGKLANIEVTFQPSSEVYSHITGPPFSPVATEPESSEDETKPNFLEQMEA
FPTELIVEQGSEILQDSPNKTNVQLSGETTEVFSSVRTPEAETIVTAAGEIKSEGATLGP
HPTSASATTGTGAGVVPQTSPQTSEKPTVPSLEINSETQAALTRGQDSTVTAWGQQASTR
ILDSNSQATTVRTAELKISLPTPPLYLLEASNETGFLIDMNEESVEGTAVYLPGLDHCKT
NPCLNGGTCYATETSYVCTCVPGFTGDQCELDFDECHSNPCRNGATCVDGFNTFRCLCLP
SYVGALCEQDTETCDYGWHKFQGQCYKYFAHRRTWDAAERECRLQGAHLTSILSHEEQMF
VNRVGHDYQWIGLNDKMFEHDFRWTDGSTLQYENWRPNQPDSFFSAGEDCVVIIWHENGE
WNDVPCNYHLTYTCKKGTVACGQPPVVENAKTFGKMKPRYEINSLIRYHCKDGFIQRHLP
TIRCLGNGRWAMPKITCMNPSAYQRTYSKKYLKNSSSSKDNSINTSKHDHRWSRRWQESR
R
NT seq
9726 nt
NT seq
+upstream
nt +downstream
nt
atgttgattaatataaagagcatcttatggatgtgctctaccttaatagcaacccatgca
ctacgtaaagtcaaaatggaaaaaagcccacctgtgaagggctccctctctggaaaagtc
aacttaccttgtcatttctcaaccgtgcctaccttaccacctaattataacagcagtgaa
ttcctccgaatcaaatggtctaagattgaattggacaagagtggaaaggacttaaaggag
actactgttcttgtggctcaagatgggaatatcaagattggccagggctacaaggggaga
gtgtcggtgcctacacatcctgaggacgagggtgatgcctcactcaccatggccaaactg
cttgccagtgatgcgggcctctaccgctgcgatgtcatgtacgggattgaagacacacag
gaggcggtgccattgaccgtggatggggttgtgtttcactacagggcggcaaccagcagg
tacactctgaattttgagaatgcacagcaggcttgtttggatgttggggcagtcatagca
agtccagaggagctcaatgctgcctatgaagatggatttgagcagtgtgatgcaggttgg
ctgtctgatcagaccgttaggtatcccatccggactcctcgagaaggctgttatggagat
atgatggggaaggaaggtgtcaggacctatggattccgttctcctcatgaaacttatgac
gtgtattgctacgtggaccatctggatggtgatgtgttccacatcacggctcccaataag
ttctcctataaggaggccgaggaagagtgtgaaaaccaggatgcccggctggcgacagtg
ggggagctccacgcggcgtggaggaatggctttgaccagtgcgattacgggtggctgatg
gatgccagcgttcgccaccctgtgactgtggccaaggcccagtgtggaggtggtttactt
ggggtgagaaccctgtatcgttttgagaaccagacaggcttcccttcccctgatagcaga
tttgatgcctactgctttaaacccaaacagaatatatcagaaactacaaccatcgatatg
aatatccttacagaaactgcatcacacagtttatccaaagaactgcaaacagtacctgac
agaactacaccaatcacccccttacccactgacttacctgtcattacagctaagttccct
gctgtgggaaacatagccagttttgagcagaaatccactgctcagtctccagtggtcaca
cacagattagccactgatccacccacacctcctgggagaaccatatctgaaattaaggaa
gaagtgccccagagtacaactgccacctcccgtcatgctactgattcatggaatgatatc
atggaatatatgccaacacaagaatcagttacacaaattgaacaaatagaagtgggtccc
ttggtaactgctatggaaatctcaaagcacattccttccacaggattctctgtaactgaa
acaccttttgtatctacaatggaacccaaaactgaaaagaaaagagtaagcactgcttct
gaattagtgaccacaacccgctatttcaccttgggagaagctggtgatggtggtgaagac
agaacatctacagttagatctggccatagcaccttggtcttcagccaaatacctgaagtc
attacagtgtcaaagacttcagaagacaccacccccagtcaactaataccagcattgaga
acaggtacttataccaatgatgaaatacaggaaaaggtcaccatcgacccatttatagga
aaaatagaggaagaagacttctctgaaatgacgttctctacagcttcctcagagcctttg
gtagaaacgaccaaatcctttgattcaccaacactgacaacagcaaagctaagcgttgtg
ccaacaggggcaagagatgtggaggaagactttacaagaacgccaattggattagaaaca
aatggctatcaagacactacacagtatgatgaggggatgacaaaagtgcattcaacccac
agcacttcaagtgtggaggtagtcactgtatcaaaatggtcatgggatgaagataatata
acctcagagtcgttagagtccacagaacatgcacattctccaaaattgcccccggcctta
ctcaccactataggagtgagtagaaaggataaagaaaccccaggttttactaaggatgaa
ggagatgagtttaatcttgtcccagatagtactcaaatgccattagagaagtttactgaa
gaagaatccacagaccgtgggaaattcacaattagatttcagccaactacatcaactggc
attacagaaaagtctacagctgaagaaagagttccccctgtcacaagcatggaagatcga
gctgctcatgcaactgtagaaggaagtgctttggctaaagcagaagatatggatgtctct
gagcctgtgtctactgcccctcagtttgcacacacttcagatatggaaggatcaacattc
gttcattatagtagcacccaggagtctacttatgtgagcacttcccatactgttcttctt
tctgtaagtcccaaggcagaatggggagtgttggtaccttctgtgccctcagaaggtgaa
gttctaggtgagccctctcaagacatccgtgccattgatcagactcacctggaagcaaca
atttctcctaaaactataagaacgacaacagaaattgcacagagaaccactcgggaagaa
tttccttgggaagatcagacttcagaaaaaccagtccctgcccttggttctgcagctggc
acagccaaggaggcagcaccgcctttggataaacacgaaagtgacgggtcagcatacact
gctgctgaagaccgatgggtgacgagttctgagagagtcccaattttagaaacaactcca
attgggaaagttgagtacactctgtcttatctacctggtgctgacactgagcacaaagcg
aaaacagatgaagtggtaaggctaacaccaagcatggggccaacagtatttttaagtcct
ggggttgaacaaaaatatgaaacagaagaagaagccactactgaggaaagagattatatt
gagttaggttcagaattattcgagaagcccaaagtcacagcactcccagaattttcaaca
attaaagccacagttccaagtgagatgactactgccttcagctcagtagacagacttcac
acaacttcagcagtgaagccctcttcagcacccactgaggaaccgcccctcatcgacaga
gaacccggtgcagagacaaccggtggcatggtaatccttgcagaatcaacagcacgtgtt
cctaccactacccttgaggataaggaaacagaaaccgatatcgatagagagtatttcaca
acgtcaagtcctccttctgtcacacagccagcgaggccacccactgtggaaggcaaagag
gccttgggtcctcaggcactttccactccagaacccccaacggggacaaaattccactct
gacataaatatttacattattgaggtcagagaaaacaagacaggtcgaatgagtgatttg
agtgtaattggtcatccaatagattcagaatctaaagaagatgaaccttgtagtgaagaa
acagattcagagcacgacctaattgctgccattttacctgagttaattgacatagatata
taccacagtgaggaggacgaggaggaagacgaagactgtgcaaatgctactgacgtcacg
accaccccatcagtgcagtacataaatgggaaacacctagtcaccactgtgcccaaggac
ccagaggcggcagaagccaggcgtggccagtttgaaagtgttgcaccttctcagaatttt
tcagacagcagtgagagtgacacccctgagtttcccatgtctgaaagggaatcatctatt
gctgtgcagccaagtgaatttaaagaaaccacagaatcgcttgaaatgacatggaagcct
gagacttaccctgaaacaccagaacatttttcaagtggtgagcctgatattttccccaca
gtcccatcatcacacaagggccaagccacagagggaccagaatcagtctcggataaaggt
cctgagcctgagcattatagtctggtgcttgaacatactgaacctggatccctctcttct
gaagagtcttcaggagatgctgaggtcagccaagaatcctcagaaatgatcttttcaagg
accatggaagtaacacttggtgaagaggcagaaaaaagtacttctaccacctatattcca
agtacagttccaagttctatgtcagcaaatgtgttggaggaagtatcagtcacgttaaca
ggaaaccacaggcctgttgacccattggccactatggaaaactgggtagaaacaacccct
ggaaaaattgtagagctctctgggaatccttcaattctgattccagaaggctctggggaa
gaagaagataaagataaaatgttcaccgtggtaacccattcatcacaaagaaatactacc
agtacactggttactttagacactggcaaaacaatgaccacagacaacttttttggtgtc
cctgcaactgccatttacttggtttctgaacaaccttctacagaagtagtgcccacaaaa
ttggtacaggaaacagacacgattgagtgggcttttagtacatctcttgagggaaagcaa
aggaaaggtgaggaggagggaactacagcttctacagttcagctacatatgcctacacag
agatcagaccagttagttttatcctctgcattagaaaacacaaatgaagctacatctagt
gattcagcatctgctaccaggaacagtgtcatgtacttaacaacatccacacagtctgaa
agagaaatgacaagttctaattctttctttccagaaacggatgttttagacaatctgggg
acacagaccaccaagaccagcagtagcagtcaacctggggttcaggaaggacaggccact
gtgtcaggtagccccggctctctctctatggagcagggctcaagagaagctgccactgac
ccagcaactaccgttccttcattttcattaaaagtagagcctgaaattcaagttaaaaag
gaaatagctagtactatgtctccccttgtggaaactgtattaccttttgagccaccagga
ctagatttgagtaatgtaacggacagagaggttattgaagttataagccaaacatccaag
gaaagccttatgtcagaggtttcagtagaatcaaatcatgggacagaaataaagggcttc
tctacagattttccattggaggaagacttcagtggtgatttcagagaatactcgacggtt
tctaaaattgtaacaaaagaagaaacagtaatgatggaaggctcaggggatgcagtattt
aaagatacccaggtttcaccatcgttaatccctacttcaggccacatcaatcacacagct
gacccagaaggacctggtggcagctttgtcagcacttcagccttcccttgggaagagttc
acagcctcaggtgagggctcaggtgagcaagtggtctcagccagcagctctgctgaccaa
gtgtttcccagtgctgtgggaaatgtttttggtacagaatctccatttgttgaccaagtt
ttgggagaagaaggtactacccaagaagctgataagagagccaccagtttaccaacagca
gaagctgaaggcactgaagctctaacagaaaagggggatgtgaaggttgatggcacagtt
tcagtggacttttcccagatgatagagccaaccaaactgtggtccaggcaaggagttact
actataggacaagaaattgaaatcaaaacaacatcagaggaaaagattcaagaacaaaaa
tattttgaatccccccaaagctctgttgcaccagagcaaaccattttttatgaaactggg
tttccaaccacagattactctatactaacaacaaagaaaacttatgatgctgatgaggaa
atggaaaaggaaggcatttccgtagttgacatgtctactcgagatccaggagtaaaggat
gtggaaccctacactactctccctgaagttactgaaaaatcccattttttcttggctact
acctcagtgactgaatctatactagatggaagtatagttacagattcattaatcaaagag
aaagaaaatataaaacccttccccaaagttatgaagccagtaattaaagagtcagatact
aatttattctctggcctgggatcaggagaagaagttttgcctaccacagtgtcaatgaat
tttactgaaatggaacaaatcattagcacattatatcccaaggcttctcaagtggacagc
ttagaaactagcatctcaagtgatcccactgaagactatgagggaatggaaaatgtggca
agtgaaattggactactcatttctaaaacagaccacatctctgaatatagtgagacagca
tccagcacaacattactagaaattttaagggacaccagaacggaaggaccgtctttagca
actctcaccttctctgcagacactgaacagcctcaaaatcagactcagagttgggaagaa
gaaattcagactagtcaaccacaacctaccactgagcaaatctctaacaagaattcttca
gtagcagaaactagagaaacagcaacctcttctactgactttctggctagaacttctggt
attggaatggccagaggatctgttacacccacaacaaaaccatctgacttgttccatgaa
tattccggagaaggatctggggaactggatatagttgacttagtccacacttctggaacc
actcaggcaaccagaaaaggaagcaccacatttgttcctaataggcccctggagaaacat
cctgaggatccaagtgctaaaaccattactgttgatgggtttccaacaggctcaatggtg
ccacctcttcatctagagcagaatgaaagctccccagatccaactatcatagtgtccaac
acagtgtcatataagaggtccactgagagtgcagatagtttccatcaccacttgggggga
tttgaggattccaccttaaaacctgacagaaaaaaagccactgaaaatattattatagat
ctggacaaagaggacaaggatttgttattgacaattacagagagtaccatacttgaaatt
ctacctgagctcacgtcagataaaaatactatcatagatattgatcacactaaacccatg
tatgaagacatccttggaatgcaaacggacatagacccagagacaccgtcaggactacag
gtcaataacgaagacagtgctcaaactcaacagaagcacgaagcagctgccaacctatcc
ttaactgtggaaccatttgaaagttctggtgatgctcttctggctagctacacacaggtg
gcacataacgaatccatgacttctgaagacagaagccagttcaatcacatgggctttatc
ttcacaactgggatccccatcccaagcacagaaacagaattagatatttttcttcccaca
gcaacatccctgcccattcctagtaagtctgccacagttggcccaaatatcgaagaacta
aacactgaagttaaagccctggaagacatatttgaatcaagcactttgtctgatggtcaa
gctattgctgaccaaagtgaagtaatatcaacatcaggtcatttggaaaggacacaggaa
gagtatgaagagaagaaatatgttggtccttcttttcagccagaattgtcttcaggagct
ggggaagcactaatagattctacaccccatgtaagtattggtactgtccacctcacgtct
cagagtttaacagaagcatctcatgtggtggaaggatcaaatcccccagattacacagat
acaacatcagcagtgttggcctttgtgaagctgtcccctgagacatcatctccgttcact
gtgcccttaggcagtggagcgtctgaacacacagagagcccccagtcaagtgctctgccc
agtgtagatcctggcacatctcaaatgtccccaggaaaactggcaaatattgaggtgact
ttccaaccatcaagtgaagtgtacagtcacataactgggcctccattctcacctgttgct
acagagccagaatcttcagaagatgaaacgaaacccaactttttagaacaaatggaagct
tttcccacagaactaattgttgaacaaggatctgagattctccaggattccccaaacaaa
accaatgttcaactttctggagaaacaaccgaagtattttctagtgtgagaacccctgag
gctgaaaccattgtcacagctgcaggtgaaattaagtcagaaggtgctacactggggcca
caccctacttcagcttctgcaaccactgggactggggcaggtgtggtgcctcagaccagc
ccacagacttctgagaagcccacggttccttctctggaaataaactctgaaacgcaggca
gctttgactagagggcaggattccacagtgacagcatggggacagcaagcgtcaacaaga
attcttgattccaactctcaagcaacaacagtgcgcactgcagagttaaagatttcactt
ccaacaccaccactttaccttctggaagcttctaatgaaaccggcttcctgattgacatg
aatgaagagtcagtggaaggcacagcagtctatttaccaggacttgatcattgcaaaaca
aacccgtgcctcaatggaggcacctgctatgctactgaaacttcctatgtgtgtacctgt
gtgccgggattcactggggaccagtgtgaacttgactttgatgaatgtcactctaacccc
tgtcgcaatggagccacgtgtgttgacggctttaatacattcaggtgcctctgccttccc
agctatgttggtgcactttgtgagcaagacactgagacatgtgactacggttggcacaaa
tttcaagggcagtgttacaagtacttcgcgcatcgacgcacatgggatgcagccgaacgg
gaatgccgtcttcaaggcgcccacctcaccagcattctgtctcacgaagaacaaatgttt
gtgaatcgtgtgggccatgactaccagtggataggcctcaatgacaagatgtttgagcat
gacttccgttggactgatggcagcacactgcaatatgagaactggaggcccaaccagcca
gacagcttcttttctgctggcgaagattgtgttgtcatcatttggcatgagaacggcgag
tggaatgatgttccctgcaattatcatcttacctatacttgcaagaaaggaacagttgct
tgcggccagccccctgttgtagaaaatgccaagacctttggaaagatgaaacctcgctat
gagatcaactccctgattagataccactgcaaagatggtttcattcaacgccaccttcca
actattcgttgcctagggaatggaagatgggctatgcctaaaattacctgcatgaaccca
tctgcataccaaaggacttattctaagaaatacttaaaaaattcctcctcatcaaaggac
aattcaataaatacatcaaaacatgatcaccgttggagccggaggtggcaggagtccagg
cgctga
DBGET
integrated database retrieval system
