Pipistrellus kuhlii (Kuhl's pipistrelle): 118705295
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Entry
118705295 CDS
T07682
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
pkl
Pipistrellus kuhlii (Kuhl's pipistrelle)
Brite
KEGG Orthology (KO) [BR:
pkl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pkl03021
]
118705295 (SCAF8)
03041 Spliceosome [BR:
pkl03041
]
118705295 (SCAF8)
Transcription machinery [BR:
pkl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
118705295 (SCAF8)
Spliceosome [BR:
pkl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118705295 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
118705295
NCBI-ProteinID:
XP_036269721
LinkDB
All DBs
Position
Unknown
AA seq
1291 aa
AA seq
DB search
MEAVKTFNSEDCASTPACTDCFSSSMDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKF
YKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNL
YRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLASTTAAMSNTPG
TPVTPVTPANVVQGLPDPWVSQIANTDTLTAVAQILQSPQGQQFQQLIQTLQIQQQKPQP
SILQALDAGLVVQLQALTAQLTAAAAAANTLNPLEQGVSFNKLMDRFDFGEDSEHSEEPK
KEIPTPQLSHVSESVNNSIFHQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFGS
EHSASPSQGSSQQHFLEPEANLDDSIDIQQQDMDIDEAQEGAEEEIFEQEAKKVAVRSRS
RTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQ
KKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMV
HRQDAFRALQKLSSGSYKIGSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDD
LEGFAEGGMIDQETVNTEWETVKSSEPVKETVPTTQSPPPPVEKETVVTTQAEVFPPPAA
VLQIPVASAVPTVSLVPPAFPVSMPVPPPGFSPMPPPPFLRASFNPSQPPPGFMPPPVPP
PVVPPPTIPPIVPTALVQPPLSMTPETVKEVGFGSLVLPGGSVASSLAPSTLPAGTVFNP
APKQAEPEEKVPHLIGHQISSGENTRSVIPNDIPSGSAILGGQPPNVTNNSGILGVQRPN
APSNSEILGVRPSNVSSSSGITGTQPPNILNNSGILGIQPPGVPSNSGLMGVLPPSLPNS
SGLIGVQPPSVLNPSGPMGTQPPGGPQSLPPLHLSNQRMPVMPMLDLRPGLLPQAPGPRF
PLLQPGIPPQRGLPPPSMLDPAFHPPPRGPFPPGDIFSPPERPFLIPGRQSIDSIANPEK
RIPLGNDNIQQEGDRDYRFPPMETRESMSRPPPVDVRDVLGRPVDPREGPGRPPLDGRDH
FVRPPVDIRENLVRPGMDHLGRRDHFGFPPEKPWGHRDFDEREPRVLPVFAGPKGLHEER
GRFRSGSYRFDPRSGPWNRGFVQEVHRDFDDRRRHWERQRDRDDRDFDFCREINGNRLGR
DRIQNTWVPPPHARVFDFFEGAASQRKGDNVPQVNGENAERHAQPPPLPVQNEPELYEKL
TSSNEINKEKSDTVADIESEPVVENTETEGT
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaagaccttcaacagcgaggattgtgcctctactcctgcttgtacagac
tgcttttccagcagcatggacacaagaagcatactgtattccttgaatgactacaagcca
ccaatttcgaaagcgaaaatgacccaaatcactaaggcagccatcaaagctattaagttc
tacaaacatgtggtacagagtgttgagaaattcattcagaaatgtaaaccagaatacaag
gtacctggactttatgtcattgactccattgtacgacaatctcgacatcagtttggtcaa
gaaaaggatgtgtttgcacccagatttagtaataacatcattagcactttccagaattta
tatcgttgccctggggatgacaagagtaaaatagtgagagtattgaatttatggcagaag
aacaatgtatttaagagtgagattatccagcctcttttggacatggcagcaggaattcct
cctcctgttgtcacacctgttctggccagtactaccgctgctatgagcaataccccagga
actcctgtgacacctgttactccagccaatgtggtccaaggtttacctgatccatgggta
tcccagatagcaaatacagatacacttacagctgtagctcagatcttacaaagtcctcaa
ggccagcagtttcagcagctcatacagaccttacagatacagcagcagaagccccagcct
tccatcctgcaggccctggatgctgggctggtggttcagctgcaggctctgaccgcacag
ctcaccgctgcagctgcagcagccaacacgctcaatcccttagaacagggggtgtccttc
aacaagttgatggataggtttgattttggggaagattctgagcatagtgaagaacccaaa
aaagaaattccaactcctcaactttctcacgtttcagaatctgtgaacaattccatcttt
catcagatagcagagcaactgcagcagcaaaacctggaacatctcaggcagcagctcctg
gaacagcaacagcctcaaaaggcaacccctcaggatagtcaagaaggaacatttggatcc
gagcattccgcatcaccctctcaaggaagcagtcaacagcatttccttgaacctgaagca
aatttggatgattccatagatattcagcaacaggacatggatatagacgaagcgcaagag
ggagcggaagaggagatctttgaacaagaagctaagaaagtggctgttcgctcaagatca
agaacacattcacgctctcgttcaagatcaccaagaaaacgaaggtctaggtcacggtcg
ggatctcgaaagcgtaaacacagaaagcgatcacgctcgcgctccagagagagaaagagg
aaatcatcacgttcctactccagtgagagaagagctagagaaagggagaaggagcgacag
aagaaggggttacctccaattcggtctaaaacattaagtgtgtgcagcactaccctctgg
gttggtcaggtggacaagaaggcaacacagcaggatttaaccaacctgtttgaagagttt
ggacaaattgaatccattaatatgattcctcccaggggctgtgcttatgtctgcatggtt
catcgacaagatgcatttcgggctcttcagaagctgagttctggatcatataaaattggg
tccaaggtcattaagattgcttgggctttaaacaaaggtgtaaaaacagaatacaaacag
ttctgggatgtggaccttggagttacgtacataccatgggaaaaagttaaagtggatgac
ttggaaggttttgcagaaggaggcatgattgaccaggaaactgtaaatactgaatgggaa
actgtgaaaagctcagaacctgttaaagagacggtcccgacaactcagagcccaccacct
cctgtcgagaaggaaacagtggtcaccacccaggccgaggtttttcctcctcctgctgct
gtgttacagattccagtagcatcagctgtgcctacagttagtttagtcccaccagcattt
cctgtgtcaatgccggttcctcctcctggattcagtccaatgcctccacctccttttcta
cgagcaagttttaacccttcacaaccacctcctggtttcatgccacctccagttccacca
cctgttgtaccgccgcctactattccaccaatagtaccaacggctttggtgcagccgcca
ttatccatgactccagaaactgtgaaagaggttggatttggtagccttgttttaccaggt
ggttctgttgccagcagtcttgctccttccactctgccagctggaactgtttttaatcct
gcccctaagcaagcagagcctgaagaaaaagtacctcatcttataggccatcagatttct
tctggtgaaaacaccagatcagtgattccaaatgatattccaagtggctctgcaatttta
ggaggacagccgccaaatgtgacaaacaattctggaattcttggagttcaaagaccaaat
gcaccaagtaattctgaaattctcggagtccggccatctaatgtttcgagtagttctggg
attactggaacccagcctccgaatattctgaacaactctggaattttgggaatacaacca
cccggtgttccgagtaattctggacttatgggagtactcccccccagcctccctaacagt
tctggacttataggagtacagccacccagcgttctaaatccgtctggacctatgggaaca
cagcctcccggggggcctcagagtttaccccctttacacctctcgaatcaaaggatgccc
gtaatgccaatgttagacctccggccaggactacttccgcaggctcctggaccccgcttc
cctctgctgcagcctggaattcctccccagcgaggactccctcccccttccatgctcgat
ccggcatttcatccaccgccccggggtccttttcctccaggagacattttcagtccgcca
gaaagaccttttctaattcctggaaggcaaagtatagacagtattgctaatccggaaaaa
aggataccgcttgggaatgacaacattcaacaggaaggcgatagagattacaggtttcct
ccgatggagaccagggaaagcatgagtagacctcccccggtggacgttagggatgtgctt
ggccggcctgtggatcccagggaaggccctggaaggccgccgttagacggcagggatcat
tttgtgaggcctcccgtggacattagagagaaccttgtgcggccgggcatggaccatctc
gggcggagagaccactttggctttcccccagagaagccgtgggggcacagagattttgac
gagagagagccccgggtgctgcctgtctttgctggtcccaaaggcttacatgaagaaagg
gggaggtttcggtctggaagctatcgatttgatccccgaagtggtccttggaacagagga
tttgttcaagaggttcacagagattttgatgaccgcagaagacactgggagaggcagagg
gatagggatgacagagattttgatttctgcagagaaattaatggaaatcgtcttggacga
gatagaattcaaaacacctgggtaccccctccccatgctcgggtttttgatttctttgaa
ggggccgcttctcaacgaaaaggtgataatgtgcctcaggttaatggtgaaaatgctgag
agacatgctcaaccgccacctttaccagtacagaacgaacctgaactctatgaaaaactg
acatcttcaaatgaaataaacaaggagaagagtgacacagttgctgatatagaaagtgaa
ccagtggtagaaaacacagaaactgaggggacataa
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