Pipistrellus kuhlii (Kuhl's pipistrelle): 118705354
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Entry
118705354 CDS
T07682
Symbol
SKIV2L
Name
(RefSeq) helicase SKI2W
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
pkl
Pipistrellus kuhlii (Kuhl's pipistrelle)
Pathway
pkl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pkl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118705354 (SKIV2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkl03019
]
118705354 (SKIV2L)
Enzymes [BR:
pkl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118705354 (SKIV2L)
Messenger RNA biogenesis [BR:
pkl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118705354 (SKIV2L)
mRNA degradation factors
3'-5' decay
Ski complex
118705354 (SKIV2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
ResIII
DUF3516
Motif
Other DBs
NCBI-GeneID:
118705354
NCBI-ProteinID:
XP_036269938
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MMETERLVLPPPDPLDLPLRAVELGCTGRWELQNVPGAPESTLPHGLPPCAPDLQQEAEQ
WFLSSPAWLPLHGLEHSARKWQRKMDPWSLLTVLGAPVPSDLQAQRQPTTGQILGFKEVL
LENTELSATTSLSLRRPPGPISQSLWGNPTQYPFWPGGMDEPSITELSTREEAEEEIDFE
KDLLTVPPGFEKGVSFAAKADPAPAAGLLSLSRLLEPLDLGGGGEDEGEAEGQPGGPRGD
TAPASPCRASLARASSLEDLVLEEASTVVSPSEPPKPLPQEQWAIPVDVTSPVGDFYRLI
PQPAFQWPFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTS
PIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWV
IFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVIST
AARPVPLEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEAKKERTSKHAQTFGAKQ
PTQQGGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEI
HLFLQRCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLF
ATETFAMGVNMPARTVVFDSMRKHDGSAFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCK
GRVPEMVDLHRMMTGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSK
AHEQALAELTKKLEALEEPDLTGQLADLPEYYSWGEELTETRSLIQRRVMESVNGLKSLS
AGRVVVVKSQEHHNALGVVLQVSSNSTSRVFTTLVLCDKPASEDPQEGRPAAPAVPYPDD
LVGFKLFLPEGPCDHTVARLQPGDVAAITTRVLRVNGEKILEDFSKRQQPKFKKDPPLAA
VTTAAQELLRLAQAHPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIRGAQCVHSPRF
PAQYLRLQERRQVQKEIERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRV
ACAMSSHELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDTGEQLPSTLKQGVERVRA
VAKRIGEVQVACGLNQTVEEFVGELNFGLVGVVYEWARGMPFSELAGLSGTPEGLVVRCI
QRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLYTQ
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacggagcgactcgtgctacctcccccagaccccctggacctgcctctccgg
gctgtggagctgggatgcactgggcgctgggagctgcagaatgtgcctggggctccagag
agcacacttccccacggcctccctccctgtgcccccgatctgcagcaagaagcagagcag
tggttcctgtcgtctccagcctggctgcctctgcacggcctggagcactcggctcgaaaa
tggcagaggaagatggatccttggtctctcctcactgtactgggtgccccagtcccctcc
gacctgcaagcccaaagacaaccaaccacgggccagatcctgggcttcaaggaggtcctg
ctggagaacacagagctgtcggccacgacctccttatctctgcgccggccaccggggccc
atctcccagtccttgtgggggaatccaacacagtaccctttctggccaggtgggatggat
gagccctccataacagagctgagcactcgggaggaagctgaggaggagatagactttgag
aaagatctcctcactgttccgcccggcttcgagaaaggcgtgtccttcgcagcaaaggct
gacccagctccagctgctgggctgctcagcctcagccgcctgctagagcccctggatctg
ggcgggggcggcgaagacgagggggaggcagagggacagccgggaggccccagaggagac
actgctccagcctctccctgccgtgcttccttggcccgagcaagcagcttggaggacctc
gtgctggaggaagcgtccacagttgtgtccccttcagagccccccaagcccctccctcag
gagcagtgggccattcctgtggacgtcacctcccccgttggtgacttctaccgcctcatt
ccccagcccgccttccagtggccgttcgagccggacgtgttccagaaacaggccatcctg
cacctggaacggcacgactccgtcttcgtggcggctcacacgtcggcagggaagacggtt
gtggccgaatatgccattgccctcgcccagaagcacatgacccgcaccatctacacctcc
cccatcaaggctctgagtaaccagaagttccgagacttccgcaacaccttcggggacgtg
gggctgctcaccggggacgtgcagctgcacccagaggcctcctgcctcatcatgacgaca
gagatcctccgctccatgctgtacagcggctcggacgtcatccgggacctggagtgggtc
atcttcgatgaggttcactacatcaacgatgcggagcgcggggtcgtgtgggaggaggtg
ctcatcatgctccccgaccacgtctccatcatcctcctgagcgccaccgtgcccaacgcc
ctggaatttgctgactggatcggacgcctgaagcgccgccagatctacgtgatcagcact
gccgcccgcccggtgcccctggagcattatctcttcacggggaacagccccaagacccag
ggggagctcttcctgttgctggactcccgaggcgccttccacacgaaggggtactacgca
gccgtggaggccaagaaggagaggacgagcaaacacgcccagacctttggggccaagcag
cccacgcagcagggggggcctgcccaggaccgcggtgtgtacctgtcgctcctggcctcc
ctccgcacccgcgcgcagctgcccgtggtggtgttcaccttctcccggggccgctgtgac
gagcaggcttcgggcctcacctccctggacctcaccacgagctccgagaagagcgagatc
cacctcttcctgcagcgctgcctcgctcgcctccgcggctctgaccggcagctgccccag
gtgctgcacatgtcggagctcctgcaccgcggcctgggcgtgcaccacagcggcatcctg
cccatcctcaaggagatcgtggagatgctcttcagccgcggcctggtcaaggtcctgttc
gccacagagacatttgccatgggtgtcaacatgccggcccggacggtggtgttcgactcc
atgcggaagcacgacggcagcgccttccgcgacctgctccccggggagtacgtgcagatg
gcgggccgggcgggccgcaggggcctggaccccacgggcaccgtcatcctgctctgcaag
ggccgcgtgcccgagatggtggacctgcaccgcatgatgacgggtaagccctcgcagctg
cagtctcagttccgcctcacgtacaccatgatcctcaacctcctgcgggtggacgccctc
cgggtggaggacatgatgaagaggagcttctccgagttcccatcccgcaaggacagcaag
gcccacgaacaggctctggctgaattaaccaagaagctggaggccctggaggagcctgac
ctgacgggccagctggcggacctgcctgagtattacagctggggagaggagctgacagaa
acccgcagcctgatccagcgacgtgtcatggagtctgtcaacgggctgaagtcgctctca
gccggaagggtggtggttgtgaagagtcaggagcatcacaacgcactgggggtggtcctg
caggtctcctccaactccaccagcagagtgttcaccaccctggtcttgtgtgataaaccc
gcgtctgaggacccacaggaggggcgcccggccgcccccgctgtgccctacccagacgac
ttggtgggattcaaactgttcctgcctgaagggccctgtgaccacacggtggccaggctc
cagcccggagacgtggctgccatcaccaccagggtgctccgggtgaacggggagaagatc
ttggaggacttcagcaagaggcagcagccgaaattcaagaaggaccctcccctcgctgcg
gtgaccactgctgcccaggagttgctgcgcctggcacaggcccacccggcgggacccccc
acccttgaccctgtcaacgacttgcagcttaaggatgtgtccgtggttgaggggggactc
cgggcccggaagctagaggagctgatccggggggctcagtgcgtgcacagcccccgtttc
cctgctcagtacctgaggctgcaggagcggcggcaggtgcagaaggagatagagcggcta
cgcttcctgctgtcagaccagtcgctgctgctgctccccgagtaccaccagcgagtagag
gtgctccgaacgctgggctacgtagatgaggcgggcaccgtgaagctggcggggcgtgtg
gcttgtgccatgagcagccacgagctgctgctcactgagctcatgttcgacaacgccctg
agtgccctgcggccggaggagatcgccgccctgctctccggcctggtctgccagagcccg
ggggacactggggagcagctcccaagtaccctcaaacagggcgtggagcgtgtgcgcgct
gtggccaagcgcattggagaggtgcaggtggcctgcggcctgaaccagacagtggaagaa
tttgtgggggagctgaatttcgggctggtcggggttgtgtacgagtgggcccggggcatg
cccttctctgagttggcagggctctcggggacgcctgagggcctggtggtccgctgcatc
cagcgcctggccgagatgtgtcgctcactgcgcggggcggcccgcctggtgggcgagcct
gtgctgggcgccaagatggagacggcggctaccctgctgcggagggacatcgtctttgca
gccagcctctacacccagtga
DBGET
integrated database retrieval system
