Pipistrellus kuhlii (Kuhl's pipistrelle): 118706810
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Entry
118706810 CDS
T07682
Symbol
SYMPK
Name
(RefSeq) symplekin isoform X1
KO
K06100
symplekin
Organism
pkl
Pipistrellus kuhlii (Kuhl's pipistrelle)
Pathway
pkl03015
mRNA surveillance pathway
pkl04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pkl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118706810 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118706810 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pkl03021
]
118706810 (SYMPK)
03019 Messenger RNA biogenesis [BR:
pkl03019
]
118706810 (SYMPK)
Transcription machinery [BR:
pkl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
118706810 (SYMPK)
Messenger RNA biogenesis [BR:
pkl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
118706810 (SYMPK)
U7-dependent histone pre-mRNA processing factors
118706810 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
118706810
NCBI-ProteinID:
XP_036272310
LinkDB
All DBs
Position
Unknown
AA seq
1274 aa
AA seq
DB search
MAGSSGDSVTRRSVASQFFTQEEGLGIDVMTTSERVVDLLNQAALVPSESKITLLKQVQE
LIINKDPTLLDNFLDEIIAFQVDKSIEVRKFVIGFIEEACKRDIELLLKLVANLNMLLRD
ENVNVVKRAILTMTQLYKVALQWMVKSRVISELQEACWDMMSAMAGDIIVLLDSDNDGVR
THAIKFVEAFIVTLSPRMADSEIPRRHEQDISLDRVPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLASIARQRPIFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLNVLKHPASLEFQAQITTLLVDLGTPQAEITRNMPSSKDARKRPRDDAESSLKKM
KLEPNLGEDDEDKDLEPGPSGTSKVSAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEVMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK
VVKPESVLIKRRLSAQGQAISVVGSLGSMATLEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTEAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFDAGL
KAEVLSFILEDIRARLDLAFAWLYQEYNAYLADGTAGSLDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTDETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSAKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMAILEASGKQEPEAKEAPAGPLEEDDLEPLAPAPAPAPRPPQDLMG
LRLAQEKALKRQLEEEQKLKPGGVGAPASAAAAASARPGPPQPDEAVDFREEGPEGETPA
IFISVDDDAGLPEAALLDSSLEGPLAKEAAPGAAAKEERSPQSRTPAGEDRPKTPSPPCA
AAEEAGDPETKGNS
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcagcagcggggacagcgtcacccgccggagcgtggcgtcacagtttttcacg
caggaggaggggctcggcatcgatgtcatgaccacttcggagagagtggttgatctcctg
aaccaggcggcactggtccccagtgagtccaagatcacactgctcaagcaggtccaggaa
ctgatcatcaacaaagaccccacgctcctggacaacttcctggatgagatcatcgctttc
caagtagataagtccatcgaagtgcgcaagttcgtcatcggcttcatcgaggaggcatgc
aagcgggacatcgagctgttgctgaaactggtcgcgaacctcaacatgctcctgagggac
gagaacgtgaacgtggtgaaacgggccatcctcaccatgacccagctctacaaggtggcc
ctgcagtggatggtgaagtcgcgggtcatcagcgagctccaggaggcctgctgggacatg
atgtccgccatggccggggacatcattgtgctgctggactccgacaacgacggcgtccgc
acccacgccatcaagttcgtggaggccttcatcgtcaccctgtcgccccgcatggctgac
tcggagataccccgacgccacgagcaggacatcagcctggaccgcgtgccgcgggaccac
ccctacatccaatacaacgtgctgtgggaagagggcaaggcagccttggagcagctcctc
aagttcatggtgcaccccgccatctcctccatcaacctgaccacagcgctgggctccctg
gccagcatcgcccgccagaggcccatattcatgtccgaggtgattcaggcctatgagacg
ctgcatgccaacctgcccccgacgctggccaaatctcaggtgagcagcgttcgcaagaac
ctcaagctgcacctgctgaacgtgctcaagcacccggcctccttagagttccaggcccag
atcaccaccctgctggtggacctgggcaccccgcaggccgagatcacccgcaacatgccc
agcagcaaggacgcccgcaagcggcctcgcgacgacgcggagtcctcgctcaagaagatg
aagctggagcccaacctgggggaggacgacgaggacaaggacttggagccaggcccatcg
gggacctcgaaggtctcagcccagatctcaggccagtcagatacggacatcacagccgaa
ttcctgcagcctctgctgacccccgacaacgtggccaacctggtcctcatcagcatggtg
tacctgcccgaggtcatgcctgcctcctttcaagccatctacacccccgtggagtcggca
ggcaccgaagcccagatcaagcacctggctcggctcatggccacacagatgacggccgca
ggcctggggcccggtgtggagcagaccaagcagtgcaaggaggagcccaaggaggagaag
gtggtgaagcccgagagcgtcctgatcaagcgccgcctgtccgcccagggccaggccatc
tcggtggtgggctcgctgggctccatggccaccctggaggaggaggcgccccaggccaag
aggaggcccgagcccatcatccctgtcacgcagccccggctggcgggggccggcggccgc
aagaaaatcttccgtctgagcgatgtgctgaagcccctgacggaggcccaggtggaggcc
atgaagctgggcgccgtgaagcggatcctgcgggcggagaaggctgtggcctgcagcggg
gcggcccaggtgcgcatcaagatcctggccagcctcgtgacgcagttcgacgccggcctg
aaggccgaggtcctgtccttcatcctggaggacatccgggcccgcctggacctggccttc
gcctggctctaccaggagtacaacgcctacctcgccgacggcaccgcgggctccctggac
aagtacgaggactgcctcatccgcctgctgtccggcctgcaggagaagccggaccagaag
gacgggatcttcaccaaggtggtgctggaggcgccgctcatcacggagagtgccctggag
gtgattcgcaagtactgcgaggacgagagtcgcacctacctgggcatgtccactctccgg
gacctcatcttcaagcgcccgtcccgccagttccagtacctgcacgtcctgctggacctc
agctcccatgagaaggacaaggtgcgctcccaggccctgctgttcatcaagcgcatgtac
gagaaggagcagctgcgcgagtacgtagagaagttcgccctcaactacctgcagctcctg
gtccaccccaacccgccatccgtgctgtttggagccgacaaggacacagaggtggcggcg
ccctggaccgacgagacagtgaagcagtgtctgtacctctacctggccctcctcccccag
aaccacaagctgatccacgaactggccgctgtgtacacggaggccatcgccgacatcaag
cggacggtgctgagggtcatcgagcagccgatccggggaatgggcatgaactcgccggag
ctgctgctcctggtggaaaactgccccaagggggcggagactctggtcacgagatgcctg
cacagcctcacagacaaagtgccgccctccccggagctggtgaagcgtgtccgggacctc
taccacaagcggctgcccgatgtccgcttcctcatccccgtgctcaacgggctggagaag
aaagaagtgatccaggccctgccgaagctcatcaagctcaaccccatcgtggtgaaggag
gtcttcaaccgcctgctgggcacccagcacggcgaagggaactcggccttgtccccgctg
aaccccggagagctgctgatcgcattacacaacatcgactcggccaagtgcgacatgaag
tccatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacgtcggaggtg
ctggccgtggtgatgcagcagctgatggagcagagccccctgcccatgctgctcatgagg
accgtcatccagtccctgaccatgtacccccgcctggggggcttcgtcatgaacatcctg
tcccgcctcatcatgaagcaggtgtggaagtaccccaaggtgtgggagggcttcatcaag
tgctgccagcgcaccaagccccagagcttccaggtcatcctgcagctgccaccccagcag
ctgggcgccgtgtttgacaagtgcccggagctccgggagcccctgctggcccacgtccgc
tccttcaccccccatcagcaagcccacatccccaactccatcatggccatcctggaggcc
agcggcaagcaggagccggaggccaaggaagcccccgcggggcctctggaggaggatgac
ctggagccgctggccccggcccccgcccccgcccccaggcccccccaggacctcatgggc
ctgcggctggcccaggagaaggccttgaagcggcagctggaggaggagcagaagctgaag
cccgggggcgtgggagcccccgcttccgccgcggccgcggcctcggccaggccgggcccc
ccgcagccggacgaagcggtggatttccgggaggaggggcccgagggggagaccccggcc
atcttcatcagcgtggacgacgacgcggggctgccggaggccgccctgctggactcgagc
ctcgaggggccgctggccaaggaggcggccccgggcgccgccgcgaaggaggagaggagc
ccccagagccgcacccccgccggagaggaccggcccaagacccccagcccgccctgcgcg
gccgccgaggaggccggggaccccgagaccaagggcaacagctga
DBGET
integrated database retrieval system
