Pipistrellus kuhlii (Kuhl's pipistrelle): 118707081
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Entry
118707081 CDS
T07682
Symbol
COL5A1
Name
(RefSeq) collagen alpha-1(V) chain
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
pkl
Pipistrellus kuhlii (Kuhl's pipistrelle)
Pathway
pkl04820
Cytoskeleton in muscle cells
pkl04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pkl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118707081 (COL5A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
118707081 (COL5A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pkl00536
]
118707081 (COL5A1)
Glycosaminoglycan binding proteins [BR:
pkl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118707081 (COL5A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
118707081
NCBI-ProteinID:
XP_036272876
LinkDB
All DBs
Position
Unknown
AA seq
2016 aa
AA seq
DB search
MEREPHPSALEAYPSFAVLAPLTGSPGTQHFSLRPWHGSVACTRAAEEDTRALIGGRRGG
ATAGGAARAGGGRGEKCWRPGPARTRSPRRPPPASAAPTEHGRGAAAARADERELQASEE
ARRARRAGSRPPRGHGPALPPVGERARSRGHKARAWAGAAPHAFLRPGRPPSPRPRVPAP
RAPRPPAWTSTPAGKRAARSVRAPGSRSQRPLLLLLLLWAPPPSRAAQPADLLKVLDFHT
LPDGITKTTGFCSTRRSSRGPDVAYRVTKDAQLSAPTKQLYPASAFPEDFSILATVKAKK
GSQAFLVSVYNEQGIQQLGLEMGRSPVFLYEDHTGRPGPEDYPLFRGINLSDGKWHRIAL
SVHKKNVTLLLDCKKKATKFLDRSDHPVVDTNGIIVFGTRILDEDVFEGDIQQLLFVSDH
RAAYDYCEHYSPDCDTAVPDTPQSQDPNPDEYYPDGDGDSAPYYYEYPYYEDTDGPSQAP
AATTAPAEAAKETTEVPEELTLPPTGAPAVPDASAGAGKEDLDPPDYDYVPSEDYYTPAP
YEDSYGEGPGAEAPPDAAGTANASNPAPPPGEGKEDLDADFTEETIKNLDENESYYDPYY
DPTVSPSEIGPGMPANQDTIFEGIDGPRGEKGQKGEPAIIEPGMLLEGPPGPEGPAGLPG
PPGTMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSA
QESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDMGPQGPRGVQGPPG
PTGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGEDG
DRGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPG
QQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGTQGPPG
PQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDG
PEGPKGRGGPNGDPGPLGPSGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRG
TPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPG
PKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPG
PPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGSEGPPG
PPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVG
LPGPAGPVGPPGEDGDKGELGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPG
PRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSG
APGADGPQGPPGGIGNPGAVGEKGEPGEAGEHGLPGEGGPPGPKGERGEKGEAGPSGAAG
PPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEAGQTGSPGPTG
EPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRG
IPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKG
DRGLPGPQGSSGPKGEQGITGPSGPLGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPG
PPGPPGPPGEVIQPLPIQARARRNIDASQLLEDAEGESYADYADGMEEIFGSLNSLKLEI
EQMKRPLGTQDNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGATCVY
PDKKSEGARITSWPKENPGSWFSEFKRGKLLSYVDAEGSPVGVVQMTFLRLLSASASQNV
TYNCYQSVAWQDAATGGYDKAMRFLGSNDEEMSYDNSPYIRALVDGCATRKGYQKTVLAI
DTPKVEQVPIVDIMFNDFGEAAQKFGFEVGPACFLG
NT seq
6051 nt
NT seq
+upstream
nt +downstream
nt
atggaacgggagccccatccctctgcactggaggcgtacccctcctttgctgtgctggcc
cctctcaccggctccccagggacccagcacttctccctgcggccctggcacggcagtgtg
gcctgcacccgggcggcagaggaggacacccgggctctgattggcggccggcgcggcgga
gcgacagccggcggagcggcccgggcggggggcgggcgcggggaaaagtgctggcgcccc
ggcccggcccgcactcggtccccgcggcgcccacctcccgcgagcgcagcgcccacggag
cacggtcgcggggcggcggcggccagggcggacgagcgggagttgcaagcgtcggaggag
gcgaggagagcgcgccgagcggggtcccggccgccccggggccacggtccagccctcccg
cccgtgggcgagcgcgcccggagccgcggccacaaagcgcgggcctgggctggggccgcc
ccccatgccttcctgaggccgggccgcccgccgagcccgcgcccgagagtccccgcgccc
cgcgccccgcgcccgccggcatggacgtccacacccgctggaaagcgcgcagcccgctcc
gtccgggcgcccggctcccggtcccaacgcccgctgctgctgctgctcctgctgtgggcg
ccgcccccgagccgcgcagctcagcccgccgacctcctgaaggttctagatttccacacc
ttgcccgacggcataaccaagaccacaggcttctgctccacacggcggtcctcccggggc
ccggacgtggcttacagagtcacgaaggatgcccagctcagcgcgcccaccaagcagctg
taccccgcgtctgcgttccccgaggacttctccatcctcgccaccgtgaaggccaagaag
ggcagccaggccttcctggtgtccgtgtacaacgagcagggcatccagcagctcggcctg
gagatgggccgctcccccgtcttcctgtacgaggaccacacggggcggccgggccccgag
gactaccccctcttccgcggcatcaacctgtccgacggcaagtggcacaggatcgcgctc
agcgtccacaagaaaaacgtgaccctgctcctggactgcaagaagaaggccaccaagttc
ctggaccgcagcgaccaccccgtggtggacaccaacggcatcatcgtgttcggcacccgc
atcctggacgaggacgtgttcgagggcgacatccagcagctgctcttcgtctcggaccac
cgggcggcgtacgattactgcgagcactacagccccgactgcgacaccgccgtccccgac
accccccagtcccaggaccccaacccggacgaatactacccggacggcgacggggacagc
gcgccctactactacgagtacccctactacgaggacaccgacggccccagccaggcgccc
gccgccaccacggcgcctgcggaggccgccaaggagaccacggaggtccccgaggagctg
actctgccccccacgggggccccggctgtgcccgatgccagcgcgggggccgggaaggag
gacctggacccgccggactacgactacgtgcccagcgaggactactacacaccagccccg
tacgaggacagctacggcgagggcccgggcgccgaggcgccgcccgatgcggccggcacc
gccaacgcctccaacccggccccgcccccgggggaggggaaggaggacctggacgcggac
ttcacggaggagaccatcaagaacctggacgagaacgagagctactacgacccgtactac
gaccccaccgtgtccccgtccgagatcgggccgggcatgcccgccaaccaggacaccatc
ttcgaggggatcgacgggccgcggggcgagaaagggcaaaagggagagcccgccatcatc
gaacccggcatgctcttggaggggcccccaggccccgaaggccccgcgggcctcccagga
cctcccgggacgatgggccccaccggccaagtgggcgaccctggagaacggggcccccct
gggcgcccaggcctgccgggggctgacgggctgcccggcccccccgggaccatgctcatg
ctgcccttccgcttcggagggggcggcgatgccggatccaaaggccccatggtctccgcc
caggagtcccaggcccaagccatcctgcagcaggcgcggctggcgttgaggggcccggcc
ggccccatgggtctgaccgggaggcccggccccgtgggcccccccgggagcggaggcctg
aagggcgagccgggcgacatgggcccgcagggcccccgaggggtgcagggcccgcccggc
ccgaccggaaagcctggacgaaggggccgggctggcagtgacggtgcgagagggatgcct
ggccagaccggccccaagggtgaccgcggcttcgacgggctggcggggctgcccggagag
aagggccaccggggtgaccctggtccctcgggccccccgggaccccccggagaagacgga
gaccggggtgacgacggagaggtcgggccccgagggctgcccggggagccggggccgcgc
gggctgctggggccgaagggccccccgggccccccgggacctcccggcgtgacggggatg
gacggccagccaggccccaaagggaacgtgggtccccagggagagcccggcccccccgga
cagcagggcaaccccggcgcccagggcctgccaggcccccagggcgccatcgggcctcca
ggagagaagggccccctggggaagccgggcctcccaggaatgccgggcgccgacggaccc
ccggggcaccctggcaaagagggcccccccggagagaaaggaacccagggcccccctggc
ccccagggccccatcggctaccccggcccccgaggagtcaagggggcggacggcatccgt
ggactgaagggcacgaagggcgagaagggcgaagacggcttcccggggttcaaaggagac
atgggcatcaagggggaccggggggagatcgggcccccgggcccccgaggggaggacggc
cccgaaggccccaagggacgcggcggcccgaacggcgaccccggtccgctgggcccctct
ggggagaagggaaagctcggcgtccccgggctcccgggctaccccggccggcaagggccg
aagggctccatcggatttccgggattccccggcgccaatggcgagaaggggggccggggc
acccctgggaagccgggaccacgggggcagcgaggcccgacgggccctcggggcgagagg
ggccctcggggcatcacggggaagcctgggcccaagggcaactctggaggcgacggcccg
gccggcccgccgggtgagcggggaccaaacggaccccaaggaccgacgggctttcctgga
cccaagggcccccctggcccccccggcaaggacggcctccccggacaccccggccagaga
ggcgagacgggtttccaaggcaagaccggccccccgggccccccgggcgtggtcggccct
cagggtcccaccggagagacgggcccgatgggcgagcgtggccacccggggccgccgggc
ccgccgggcgagcagggcctcccgggcctcgccgggaaggaggggacgaagggggacccc
ggccctgccggcctgcccgggaaggacggccccccaggactgcgcggcttccccggggac
cgcgggctcccgggccccgtgggagcgctcggactgaagggcagcgagggcccccccggc
ccgccgggccccgcgggatctcccggggagagagggccagccggagctgccgggcccatc
gggattccaggcagacctggcccccagggacccccggggcccgccggcgagaaaggagcg
ccgggcgagaaaggcccacaaggccccgccggtcgcgacggcctccagggtccggtgggg
ctgcccggcccggccggccccgtgggcccccccggagaagacggggacaagggagagctc
ggggagccggggcagaagggcagcaagggggacaaaggagagcagggtccgccagggccc
acgggcccgcaaggccccatcggacagccgggcccctcgggagccgacggagagccgggg
ccccgcggccagcagggcctcttcgggcagaaaggggacgaaggcccacgagggttcccc
gggccccctgggcccgtggggctgcagggcctgccggggccgccgggagagaagggcgag
acgggggacgtgggccagatgggcccgcccggcccgcccggcccccgagggccctccgga
gcgcccggagctgacgggccgcaggggccccccggaggaatcggcaaccccggagccgtg
ggggagaagggcgagcctggagaagctggcgagcatggccttcccggagaaggggggccc
ccgggacccaaaggcgagaggggggagaagggcgaggccggcccctctggtgctgctgga
ccccccggccccaaaggcccgcccggcgacgacggccccaagggcagccccggccccgtc
ggtttccccggagaccccggtccccccggagagcccggccccgcgggtcaggacggcccc
cctggggacaaaggggatgacggcgaggccgggcagacgggatccccgggccccaccggt
gagccaggcccgtccgggcctccaggaaaacggggacccccggggcccgcaggccctgaa
ggccgacagggggaaaagggagccaagggggaagccggcctggagggtcctcctgggaag
actggccccatcggcccccagggggcccccgggaagccggggcccgacggcctgcggggg
atccccggccccgtgggcgaacagggactcccaggatccccaggccccgacggccccccc
gggcccatgggccccccaggactccccggcctcaaaggcgactctggccccaaaggggaa
aagggtcacccaggcctgatcggactcatcgggcccccgggcgagcagggcgagaagggc
gaccgcggcctcccgggcccccagggctcctccggccccaagggagagcaggggatcact
ggtccttccggccccctcggccccccggggcccccgggcctgccgggtcctcccggcccc
aaaggtgctaagggctcctcgggtcccactggcccgaagggtgaggcaggccacccagga
ccccccggcccaccgggccccccgggcgaggtcatccagccgctgccgatccaggcccgc
gcgcggcggaacatcgacgccagccagctgctggaggacgccgagggcgagagctacgcc
gactacgccgacggcatggaggagatcttcggctcgctcaactcgctcaagctggagatc
gagcagatgaagcggccgctgggcacccaggacaaccccgcccgcacctgcaaggacctg
cagctctgccaccccgacttcccggacggcgaatactgggtggacccgaaccagggctgc
tccagggactccttcaaagtttactgcaacttcacggccgggggcgccacgtgcgtctac
cccgacaagaagtccgagggggccagaatcacctcgtggcccaaggagaacccgggctcc
tggttcagcgaattcaagcgcgggaagctgctgtcctacgtggacgccgagggcagcccc
gtgggcgtggtgcagatgaccttcctgcggctgctgagcgcctcggccagccagaacgtc
acctacaactgctaccagtcggtggcctggcaggacgcggccacgggcggctacgacaag
gccatgcgtttcctgggctccaacgacgaggagatgtcctacgacaacagcccctacatc
cgcgcgctggtggacggctgcgcgacgcggaagggctaccagaagacggtgctggcgatc
gacacgcccaaggtagagcaggtgcccatcgtggacatcatgttcaacgacttcggcgag
gccgcccagaagttcgggttcgaagtggggccggcctgcttcctgggctag
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