Pipistrellus kuhlii (Kuhl's pipistrelle): 118710540
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Entry
118710540 CDS
T07682
Symbol
PABPC5
Name
(RefSeq) polyadenylate-binding protein 5
KO
K13126
polyadenylate-binding protein
Organism
pkl
Pipistrellus kuhlii (Kuhl's pipistrelle)
Pathway
pkl03015
mRNA surveillance pathway
pkl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pkl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118710540 (PABPC5)
09123 Folding, sorting and degradation
03018 RNA degradation
118710540 (PABPC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkl03019
]
118710540 (PABPC5)
03041 Spliceosome [BR:
pkl03041
]
118710540 (PABPC5)
Messenger RNA biogenesis [BR:
pkl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118710540 (PABPC5)
mRNA cycle factors
Stress granule specific factors
118710540 (PABPC5)
Spliceosome [BR:
pkl03041
]
Complex C
Other components
Complex C specific factors
118710540 (PABPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_10
RRM_7
RBD_DEAH11
RRM_3
TC1
Motif
Other DBs
NCBI-GeneID:
118710540
NCBI-ProteinID:
XP_036278974
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MGSGEPNPAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPETRSPLG
YGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNR
ALFYLFSVFGNILSCKVVCDDYGSKGYAYVHFDSLAAANRAIWHMNGMRLNNRQVYVGRF
KFPEERAAEVRIRDRATFTNVFVKNFGDEVDDKKLKEIFSEYGPTESVKVIRDASGKSKG
FGFVKYETHEAAQKAVLDLHGKSVDGKALYVGRAQKKIERLAELRRRFERLKVKEKSRPP
GVPIYIKNLDETIDDEKLKEEFSSFGSISRAKVMVEVGQGKGFGVVCFSSFEEATQAVGE
MNGRMVGSKPLHVTLGQARRRW
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggggagtggggagcctaatcctgctggcaagaaaaagaagtacctcaaagctgccctg
tatgtaggtgacttggatccagatgtcaccgaggacatgctttataaaaagttcaggcct
gctggccctctgcgcttcaccagaatctgccgtgacccagagacccgcagccctctgggc
tatggctatgttaacttccgctttcctgcagacgctgagtgggccctgaacaccatgaat
tttgatttgattaatggcaaaccattccgtctcatgtggtctcagccagatgaccgctta
agaaagtctggagttggaaatatattcatcaaaaacctggacaaatccatagacaacagg
gctcttttttatttgttttctgtttttgggaacattctctcttgcaaagttgtctgcgat
gactacggctctaagggttatgcctatgtgcattttgacagcctggcagctgccaataga
gccatctggcacatgaatggcatgcggctcaacaaccgccaggtgtatgttggccgattc
aaatttccagaagagcgggcagctgaagttaggatcagggatagagcaactttcaccaat
gttttcgttaaaaactttggagatgaagtagatgacaaaaaactgaaggaaattttcagt
gaatatgggccaaccgagagtgttaaggtaataagagatgccagtgggaaatctaaaggc
tttggatttgtaaaatatgagacacatgaggctgctcaaaaggctgtgctagacctgcac
ggaaagtccgtcgatggtaaagccctatatgtagggcgagcacagaagaaaattgaacgc
ctggctgaattaaggcgaagatttgaaaggctgaaagtaaaagaaaaaagtcggcctccg
ggggtgcctatttatattaagaacttggatgagaccatcgatgatgaaaaactaaaggag
gaattttcttcctttggatcaattagccgagccaaagtgatggtggaagtgggacaaggc
aaagggtttggtgtagtctgtttctcctcttttgaagaggctacccaagcggtgggtgag
atgaatggtcgcatggtgggctccaaaccgctgcatgtgaccctgggccaagccaggcgc
aggtggtga
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