Pipistrellus kuhlii (Kuhl's pipistrelle): 118712231
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Entry
118712231 CDS
T07682
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pkl
Pipistrellus kuhlii (Kuhl's pipistrelle)
Pathway
pkl05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
pkl00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
118712231 (DICER1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pkl03036
]
118712231 (DICER1)
Chromosome and associated proteins [BR:
pkl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
118712231 (DICER1)
microRNA pathway
RISC loading complex
118712231 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
DEAD
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
118712231
NCBI-ProteinID:
XP_036281682
LinkDB
All DBs
Position
Unknown
AA seq
1911 aa
AA seq
DB search
MKSPALQPLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDRNT
IVCLNTGSGKTFIAVLLTKELSYQVRGDFSRHGKRTVFLVNSANQAAQQVSAVRTHSDLK
VGEYAHLEVHASWTKERWNQEFAKHQVLIMTCYVALIVLKNGYLSLSDINLLVFDECHLA
ILDHPYREIMKLCESCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATDL
VVLDRYTSQPYEIVVDCGPFVDRSGLYERLLMELEEALDFVNDCNISAHSKERDSTLISK
QILADCRAVLVVLGPWCADKVAGMMVRELQKHIKHEQEELHRKFLLFTDTFLRKIHALCE
EHFSPASLDLKFVTPKVLKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDEDE
DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYIMLADTDKIKGFEEDLKTYKAIEKILRNKCSKSAETGETD
LEPVVDDDEVFPPYVLRPEDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPD
GTFYSTLYLPINSPLRASIVGPPMSCIRLAERVVALICCERLHKIGELDDHLLPVGKETV
KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTP
LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSL
QMLELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMEDI
EKSEARIGIPSTKYSKETPFVFQLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF
PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR
KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSVLYRLHCLLTAEELRAQTASDAGV
GVRSLPVDFRYPNLDFGWKKSIDSKSFISIANSSSAEHDAHCKHSTIVPEHAAHQGANRI
SSLESHDQMPVTCRALLSEPSGKLPIDVPTDLTAINGLSYNRNLANGSYDLANRDFCQGN
QLNYYKREIPVQPTTSYPIQNLYNYENQPTPSDECTLLSNTYLDGNANTSTSDGSAARAT
VPGTTEAVAALKDRLGSARSPPPGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGD
SFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKRGLPSRMVVSIFDPPVNW
LPPGYVVNQDKSNADKWEKDDTTKDCLLANGKLDDDFEEDEEEEGLLWRAPKEDADYEDD
FLEYDQEHIQFIDNMLMGSGAFVRKIPLSPFSATDAAYEWKMPRKAPVGGMPFAADFEDF
DYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGADTGKQSISYDLHTEQCIADKSIAD
CVEALLGCYLTSCGERAAQLFLCSLGLKVLPVEKGPAREAASSQQRGLAGSRAPAGSPRP
ATWRAPEYGCLKIPPRCMFDHPDADKTLTHLISGFENFEEKINYRFKNKAYLLQAFTHAS
YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK
YDYHKYFKAVSPELFQVIDVFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDI
FESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFSPAE
RTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPSS
NT seq
5736 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccctgctttgcaacccctcagcatggcaggcctgcagctcatgacccctgct
tcctcaccaatgggtcctttctttggactgccatggcaacaagaagcaattcatgataac
atttacacgccaagaaaatatcaggttgaactgctcgaagcagctctggatcgtaacacc
atagtctgtttgaacactggctcagggaagacgttcattgcagtactactcactaaagag
ctgtcctaccaggtcaggggagacttcagccgacatgggaaaaggacggtgttcttggtc
aactccgcaaaccaggctgctcagcaagtgtcagctgtcaggactcattcagacctcaaa
gttggcgaatacgcacacctagaagtacatgcctcttggactaaagagagatggaaccag
gagttcgctaagcaccaggttctcattatgacttgctatgtcgccttgattgttttgaaa
aatggttacttgtcactgtcagacattaaccttttggtatttgatgaatgtcaccttgca
atcctagaccacccatatcgagaaattatgaagctctgtgaaagttgtccatcatgccct
cgtattttgggactaactgcttccattttaaatgggaaatgtgatccagaggaattagaa
gaaaagattcagaaactggagaaaattcttaagagtaacgcggaaactgcaactgacttg
gtggtcttagacagatacacgtctcagccgtatgagattgtggtggactgtgggccattt
gtggacagaagtgggctttatgagcgactgctgatggagttagaggaagcacttgacttt
gtcaatgactgtaacatatctgcacattcaaaagaaagagattctactttaatttctaaa
cagatcctggcggactgccgcgcggtgctggtggtgctgggcccctggtgtgcggacaaa
gtggccggcatgatggtcagggagctgcagaagcacatcaagcacgagcaggaggagctg
cacaggaagttcctgctgttcacggacacgttcctgcggaagatccacgcgctgtgcgag
gagcacttctcgcccgcctccctggacctcaagtttgtgacgcccaaggtgctcaagctg
ctggagatcctgcgcaagtacaagccgtacgagcggcagcagttcgagagcgtggagtgg
tacaacaaccgcaaccaggacaactacgtgtcctggagcgactccgaggacgaggacgag
gatgaggagattgaggagaaggagaagccggagaccaacttcccttctcccttcaccaac
attctctgcgggatcatcttcgtggagaggagatacacggcggtcgtcttaaaccgattg
ataaaggaagctggcaaacaggacccggagctggcttacatcagcagcaacttcataacc
ggacacggcatcgggaagaaccagcctcgcaacaagcagatggaagcagaattccggaag
caggaagaggtacttaggaaatttcgagcacatgagaccaacctgcttattgcaacaagt
attgtggaagagggtgttgatataccaaaatgcaacttggtggtccgttttgatttaccc
acagaatatcgatcctatgttcaatctaagggaagagcaagggccccaatctccaattat
atcatgttagcagatacggacaaaatcaaaggttttgaagaggaccttaaaacatacaaa
gctattgaaaagatcctgagaaacaaatgttccaagtcagctgagaccggggagacggac
ctggagcccgtggtggacgacgacgaggtgttcccgccgtacgtgctgaggcccgaggac
ggcggcccgcgcgtcaccatcaacacggccatcgggcacatcaacagatactgcgctagg
ttaccaagtgacccgttcactcacctcgctcctaagtgcagaacccgggagctgcccgac
gggaccttctactcaactctctacctgccaatcaactcacctcttcgagcctccatagtg
ggtcccccaatgagctgtatacgattggctgaaagggtggtagcgcttatttgctgtgaa
agactgcacaaaattggtgaactggacgaccatctgctgccagtggggaaggaaacggtt
aagtatgaagaagagcttgatttgcatgatgaggaggagaccagcgtccccggccgacca
ggttccacaaagcgaagacagtgctaccccaaagcaattccagaatgtctgagggatagc
taccccaaacccgatcagccctgttacctgtatgtgataggaatggttctcacgacccca
ttacctgatgaactcaacttcagaaggcggaaactctatccccctgaggacaccacaaga
tgctttggaatactgacagcaaaacccatacctcagatcccgcacttcccggtgtacacc
cgctctggagaggtcaccatctctatcgagctgaagaagtccggcttcacactgtctctc
cagatgctcgagctgattaccaggctccaccagtacatattctcccacatcctccgcctc
gaaaagcctgcgctagaattcaaacccacagacgccgactcagcatactgtgttctacct
ctgaatgttgttaatgactccagcactctggacattgactttaagttcatggaagatatt
gagaaatcagaagctcgcataggcattcccagtacaaagtattcgaaagaaacgcccttt
gtttttcaattggaagattaccaggatgcagttatcattccacggtatcgaaattttgat
caacctcatcggttttatgttgctgacgtgtacactgaccttaccccactgagcaaattt
ccttcccccgagtatgagacgtttgcagagtattacaaaaccaagtacaaccttgacctg
accaatctcaaccagccgctgctggatgtggaccacacgtcctccagacttaaccttctg
acacctcgccatctgaaccagaaagggaaagcccttcccctgagcagtgctgagaagagg
aaagccaagtgggaaagtctgcagaacaaacagatcctggtccctgagctctgtgctatc
cacccgatcccggcctccctgtggaggaaggcagtctgcctgcccagcgtgctgtaccgc
ctgcactgcctcctgaccgcggaggagctccgcgcccagacggccagcgacgctggcgtg
ggggtcaggtccctccctgtggactttagataccctaacttagactttgggtggaaaaaa
tctatcgacagcaaatctttcatctcaattgctaactcctcctcagctgaacacgatgct
cactgtaagcacagcacaattgtccctgaacatgctgcacaccaaggtgctaatagaatc
tcctctctggaaagtcatgaccaaatgcctgtgacctgcagagcgctgctcagtgagcca
tccggtaagctccccattgacgtgcccacagatctcacagcaattaacggtctttcttac
aacagaaatcttgccaatggcagttatgatttagctaacagagacttttgccaaggaaat
cagctgaattactacaagcgggaaatacctgtacaaccaactacctcatatcccattcag
aatttatacaattatgagaaccagcccacgcccagcgatgaatgtactctactgagtaat
acataccttgatggaaacgctaacacatctacctcagatggcagtgccgcgagggccact
gtgcccggcaccacagaagctgttgccgcgctcaaggacaggctgggctctgcgcggagc
ccccctcctgggtactcctcccggactctgggcccgaaccccggactcatccttcaggcg
ctgaccctttcaaacgccagcgatggatttaacctggagcggctcgagatgctgggggac
tccttcctcaagcacgccatcaccacgtacctgttctgcacgtacccagacgcacacgag
ggccgcctgtcctacatgaggagcaagaaggtcagcaactgcaacctgtatcggcttggg
aagaagagggggctgcccagccgcatggtggtgtccatattcgacccccccgtgaactgg
cttcctcccggctacgtggtgaaccaggacaaaagcaacgccgacaaatgggagaaggac
gacacgacaaaggactgcctgctggctaacggcaagctggacgacgacttcgaggaggac
gaggaggaggagggcctgctgtggagggcccccaaggaggacgccgactacgaggacgac
ttcctggagtacgaccaggagcacatccagttcatagacaacatgctgatgggctcgggg
gcgttcgtgaggaaaatcccgctctcgccgttctcggccaccgacgccgcctacgagtgg
aaaatgcccaggaaggcccccgtgggcggcatgccgttcgcagcagacttcgaggacttt
gactacagctcctgggacgccatgtgctacctggatcccagcaaagccgtggaggaggat
gacttcgtggtgggcttctggaacccgtccgaggagaactgcggcgcggacacgggcaag
cagtccatctcttacgacctgcacacggagcagtgcatcgccgacaagagcatcgccgac
tgcgtggaggccctgctgggctgctacctgaccagctgcggcgagcgggccgcccagctc
ttcctctgctcgctgggcctgaaggtgctgccggtggagaagggccccgcccgggaggct
gccagcagccagcagaggggcctcgccgggagccgggcccccgccggcagcccccggccc
gccacgtggagggccccggagtacggctgcctcaagatcccgccccgctgcatgttcgac
cacccggacgccgacaagacgctcacgcacctcatatcgggctttgagaactttgaggag
aaaatcaactacagattcaagaacaaggcttacctgctgcaggcttttacacacgcctcc
taccactacaacaccatcaccgattgctaccagcgcttggagttcctgggagacgccatc
ttggactacctcataaccaagcacctttacgaagacccgcggcagcactccccgggcgtc
ctgaccgacctgcgctccgccctggtcaacaacaccatcttcgcgtccttggccgtgaag
tacgactaccacaagtacttcaaggccgtgtcccccgagctcttccaggtcatcgacgtc
ttcgtgcagttccagctcgagaagaacgagatgcaggggatggactccgagctcaggcgg
tccgaggaggacgaagagaaggaggaggacattgaggtccccaaggccatgggggatatt
ttcgagtcgcttgctggtgccatttacatggacagcgggatgtcgctggagatggtttgg
caggtgtactacccgatgatgcggccgctgatagaaaaattttctgcaaatgtgccccgt
tcccctgtgcgagaattgctggaaatggaaccagaaaccgccaaatttagcccggcggag
aggacgtacgacggcaaggtcagagtgaccgtggaggtggtggggaagggcaagttcaaa
ggcgtgggccgcagctacaggatcgccaagtccgcggcggcaaggagagccctccgcagc
ctcaaagccaaccaacctcaggttcccagcagctga
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integrated database retrieval system
