Pipistrellus kuhlii (Kuhl's pipistrelle): 118712305
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Entry
118712305 CDS
T07682
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
pkl
Pipistrellus kuhlii (Kuhl's pipistrelle)
Pathway
pkl04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pkl00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
118712305 (COL20A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Pur_ac_phosph_N
VWA_2
Ig_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
DUF4959
YjeF_N
Motif
Other DBs
NCBI-GeneID:
118712305
NCBI-ProteinID:
XP_036281777
LinkDB
All DBs
Position
Unknown
AA seq
1350 aa
AA seq
DB search
MGTQAHPHLGVCLWLWLGVPLGLGPEQANGHLQLAVLPEDQLQIQWAESEGHGLGYLVQV
KPVAGDVEQEVMLTTKTPKATVGGLSPSKRYTLQIFELISSGNVLLAQREFVIKDLRSHS
VSGSSWRPLGAALEPTPTHIGSLDPDPRVILAPSQDPPTLGGSRWDEGFPGKDQRSPRGP
AGTAPAQLSPGRPGRPRMSAGNREKPAGLQFHCTPPTPADMIFLVDGSWSIGHSHFQQVK
DFLASIIEPFEIGPDKVQVGLTQYSGDPKTEWDLNTFSTKEEVLAAVHSLHYRGGNTFTG
LALTHVLEQNLKPAAGPRPEAAKVVILVTDGKSQDDAPAAGRTLRSLDVDIFAVGVKNAD
EAELRLLASPPLDITVHSVQDFPQLSTLAGLLSRLVCQQVQGRSPRPGPVQPAAATPALD
PLSAPTSLVLTQVTSSSAHLSWTPALQPPLKYLVVWRPSRGGPPREVEVDGPRTSVELHG
LTSGTEYLLSVLPVYEAGAGAGLQGLVTTVPLPPPQALALATVTPRTIRLTWQPSAGATQ
YLVRYSLVSPKGEEKGREVRVVQPEVLLGGLEPGRDYDIRVQSLQGAQASEARGIHARTP
PLAPPRPLTFSDVSHDSARVSWRGTLRPVQLFRVSYLSSKGGHSGQMEAPGNATSVTLGP
LSSSTTYTVRVTRLSPGGGSTTMAGRLTTRKVPSPGRLAVTQLPGGEVQLAWAAAAASGV
LRYQIKWTPLGDGKAHEVSVPGSLRTAVLPGLGGHLEHEITLLAYYRDGARSDPVSVHYS
PRVSWSPPSNLTLTSESPNSLLVSWTPPTGHVLHYRLTYTLASGSGPEKSVSVPGPRSHV
TLPDLLAATEYRVLVSAVYGAGESVAVTATGRTACPALHPDGSLAGFDLMVAFGLVEREY
ASIRGVAMEPSAFGSTRTFTLFRDAQLTRRASDIHPALPPEHTVVFLLRLLPDTPREAFA
LWQMTAEDFRPVLGVLLDAGRKSLTYFSHDPGAALQEVTFDLPEVRRIFFGSFHKVHVAV
GRSRVRLYVDCRKVAERPIGAVGSPPAAGFVTLGRLALARGPRSSSAALQLQLLQIVCGD
TWAEEDRCCELPALKDGEACPAFPPACSCSCSSQTPGPPGPQGPPGPPGRNGASGQQGFP
GPRGEPGPPGQTGPEGPGGQQGSPGTQGRTVQGPVGPPGVKGEKGDRGLPGLQGHPGRQG
DPGEAGLQGPKGMRGLEGTAGLPGPPGPRGYPGMAGARGTSGERGAPGTVGPTGLPGPKG
ERGEKGEPPSLAAIYQLVSHACESAIQTHVLKCDSSLHKSSRPAMPVLEAPGPLVTPREA
QPPREAGTGGFHPEDRDLQVSSPLVPGRLE
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgggcacccaggcgcacccccacctaggggtctgcctctggctgtggctgggtgtcccc
ctgggacttggtccagaacaagcaaacggccacctgcagctcgctgtgctgcccgaggac
cagctgcagatacagtgggcagagtcggaggggcatggcctcggctacctggtgcaggtg
aagcccgtggcaggggacgtggagcaggaggtgatgctgaccaccaagacccccaaggcc
acagtggggggcctgagcccctccaagaggtacaccttgcagatctttgagctcatcagc
tcagggaacgtcctgctggctcagagggagtttgtgatcaaggatttgaggagtcactct
gtgagcggaagcagctggagaccgctgggggcagctctagagcccacacctacccacatc
gggagtctagaccctgacccccgagtcatcttggccccaagccaagacccgcccactctg
ggtgggtccaggtgggatgagggatttcctggcaaggatcaacgctcccccagaggcccc
gcgggaacggcccccgctcagctcagcccaggaaggcccggccgccccaggatgtctgcg
ggaaacagagagaagccagctggcctccagttccattgcacgccccccacacccgccgac
atgatcttcctggtggacgggtcttggagtattggccacagtcacttccagcaggtcaaa
gacttcctggccagcatcatcgagccctttgagattgggccggataaagtccaagtgggc
ctgactcagtacagcggagaccccaagaccgagtgggacctgaacaccttcagcaccaag
gaggaggtgctggctgccgtgcacagcctccactacagagggggaaacacgttcacaggc
ctggccctgacccacgtgctagagcagaacctgaagcctgcagcaggtccccgtccagag
gcggccaaggtggtgattctagtgacggatggcaagtcccaggacgatgctcctgctgct
ggccgcaccctcaggagcctggatgttgacatctttgctgtgggcgtgaagaatgctgat
gaggctgagctgaggctcctggcgtccccgccgctggacatcaccgtccacagcgtgcag
gacttcccccagctcagcacactggccggcctgctcagccgcctcgtttgccagcaggtc
cagggcaggagcccacgtccaggcccagttcaaccggcagcagccactccagccctggac
cccctctccgctcccaccagcctcgtcctgacccaggtgacctcctccagcgcccacctg
tcctggactccagccctgcagccgccgctcaagtacctggtggtgtggcggccttctagg
ggcgggcccccccgggaggtggaggtggacgggccccgcacgtccgtggagctgcatggc
ctgacctccggcacggagtacctgctgtccgtgctccccgtgtacgaggcgggggcgggg
gcgggcctgcagggcctggtgaccacagtgcctctgcctccgccccaggcactcgccctg
gccacagtgactcccaggaccatccgcctcacctggcaaccctcagcgggggccacccag
tacctggtgcggtactctctggtttcccccaagggcgaggagaagggcagagaggtgcgg
gttgtgcagccggaggtgctgctgggtggcctggagccgggcagggactacgacatccgg
gtgcagagcctgcaaggtgcacaggccagcgaggctcggggcatccacgccaggacccct
cccctggctccccccagacccctgaccttctcagacgtgagccatgactcggcccgtgtg
tcctggaggggcaccctgaggccggtgcagctgttcagggtcagctacttgtccagcaag
ggcggccactcggggcagatggaggctcccggcaatgccacctcagtcactctgggccct
ctctcctcctccaccacctacaccgtccgagtcacccgcctctcccccgggggcggctcc
accaccatggccggccgcctgaccacacggaaagtccccagccccggccggctggccgtg
acacagctccctggcggggaggtccagctggcgtgggcggccgcagcggcgtccggcgtg
ctgcgctaccagatcaagtggacacctctgggggatgggaaggcccatgaggtctccgtc
cccgggagcctgcgcacggccgtcctgcccggcctcggggggcacctggagcacgagatc
accctcctggcctactacagggacggggcccgcagcgaccccgtgtccgtccactacagc
ccccgagtcagctggagcccaccctccaacctgaccctgacttctgagtcaccaaacagc
ctactggtcagctggacgccccccactggccacgtcctccactaccggctcacgtacacg
ctggcctcgggctctggaccagagaaatcagtctctgttccaggacccaggagccatgtg
acgctccctgacctgctggcagctaccgagtacagggtcctggtctccgcggtgtacgga
gcaggggagagtgtggcagtgactgctacaggccgcacggcctgcccagccctccaccca
gatggctcccttgcaggctttgacctcatggtggccttcgggctggtggagagggagtac
gcctccatccgcggggtggccatggagccctctgcatttggctccaccaggaccttcacg
ctcttcagagacgctcagctgacacgccgagccagcgacatccacccggccctcccgccc
gagcacaccgtcgtcttcctcctgcgcctcctccccgacacgccccgtgaggccttcgcg
ctgtggcagatgacagctgaggacttccgccctgtcctcggggtcctgctggacgcaggc
agaaagtccctgacctacttcagccacgaccccggggcggccttgcaggaggtgaccttt
gacctgcccgaagtgaggaggatattcttcgggagcttccacaaggtgcacgtggccgtg
ggacgctccagggtccggctctatgtggactgcaggaaggtggccgagaggcccatcgga
gcggtgggcagccctcctgccgccggcttcgtcacgctggggaggctggccctggcccgg
ggcccccggagcagctcggctgcgctccagctgcagctgctgcagatcgtgtgcggtgac
acctgggcagaggaggacaggtgctgcgagctccctgcgttgaaggatggagaggcctgc
cctgccttccctcccgcctgctcctgctcctgctcctcgcagacacctgggcctccggga
ccccaagggcctccaggcccccctggcaggaatggagcctcaggacagcagggcttcccc
gggcccaggggagagcccgggccacctggacagaccggacccgaaggtcctggaggtcag
caggggtcaccagggacccagggccgaactgtccagggacctgtgggtccgccaggggtc
aaaggagagaagggggaccgtggactcccgggcctgcagggtcaccccggccgccagggc
gaccccggggaggctggcctccagggtccaaagggcatgagaggcctggagggcaccgct
ggcctgcccggaccccctgggcccaggggctacccaggcatggcgggagccaggggcacc
agtggggagcgaggagccccagggactgtggggcccacgggcctgcctgggcccaagggg
gagcgaggagagaagggcgagccgccgtccttggccgccatctaccagcttgtgagccac
gcctgcgagtccgccatccagacgcacgtgctgaagtgtgactcctccctccacaagagt
tccaggcccgccatgccagtcctggaggcccctgggcccctggtcacccccagggaggcc
cagcccccccgagaagcggggactggtggcttccaccctgaagacagagacctgcaggtc
tcctctcccctcgtgccaggccgcctggagtga
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