Pipistrellus kuhlii (Kuhl's pipistrelle): 118713537
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Entry
118713537 CDS
T07682
Symbol
PCF11
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
pkl
Pipistrellus kuhlii (Kuhl's pipistrelle)
Pathway
pkl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pkl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118713537 (PCF11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pkl03021
]
118713537 (PCF11)
03019 Messenger RNA biogenesis [BR:
pkl03019
]
118713537 (PCF11)
Transcription machinery [BR:
pkl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
118713537 (PCF11)
Messenger RNA biogenesis [BR:
pkl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
118713537 (PCF11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCF11_RFEG_rpt
PCF11_charged
Pcf11_helical
CID
Pfc11_Clp1_ID
Pcf11_C
zf_PCFS4
SHOCT
SelA
Motif
Other DBs
NCBI-GeneID:
118713537
NCBI-ProteinID:
XP_036284108
LinkDB
All DBs
Position
Unknown
AA seq
1684 aa
AA seq
DB search
MSEPTPAEAGTAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEA
QTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRS
TWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEEPSTPGTVV
SSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV
QQETSNLGSGSAPSKLHVSQIPPMGVKTPHQIPLQPEKSRPGPSLQIQDLKGTNRDPRLN
RLSQHSSHGKDQSHRKEFLMNTLNQSDIKTSKTIPSEKLNSSKQEKSKSGEKITKKELDQ
LDSKSKSKSKSPSPLKNKFSHTKDLKNQESECPRMSDLSKRDPRLKKHLPDKTDSKDDDA
KEKRKTSEKKDKDEHMKSSEHRLAGSRNKIVNGIVQKQDVITEDSEKQGTKPGRSSTRKR
SRSRSPKSRSPIIHSPKRRDRRSPKRRQRSMSPTSTAKAGKIRQSGCKPSHMEDFMPPSR
EERNAKRGTKQDVRDPRRIKKTEEERPQETTSQHSIKSGTEPKENIENWSSSKSNKRWKS
GWEENKSLQQSDDHSKSPHLRHRESWSSTKGILSPRAPKQQHRLSVDANLQIPKELTLAS
KRELLQKTSERLASGEITQDEFLVVVHQIRQLFQYQEGKHRCNVRDSPSEENKGGLKKKP
LLSDAELTYYEHKAKLKRTQVQHSFPRLDLLDPDIFDYPLTDALLSGIECEPSKSKHASR
NSGAQFDRKEQFSERARRLSPISGSRSYAENLSPHEGRRRHDEQVSAKGVREEQRSPFND
RFPLKRPRYEDSDKPFVDSPASRFAGLDTNQRLTALAEDRPLFDGPSRPSVTRDGPTKMI
FEGPNKLSPRIDGPPAPGSLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVG
TPLRFEGPIGQAGGGGFRFEGSPGLRFEGSAGGLRFEGPGGQPVGGLRFEGHRGQPVGGL
RFEGPHGQPVGGLRFDNPRGQPVSGLRFEGGHGPSGAAIRFDGPHGQPAGGIRFEGPLLQ
QGVGMRFEGPHGQSVAGLRFEGQHTQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFE
GPVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTGQPG
PQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGARFDNHPSQRLESVSFNQ
TGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGPGNQSFSNPLRASGHYFDE
KNLQSSQFGNFGNLPAPITVGNIQASQQVLTGVAQPVPFGQGQQFLPVHPQNPGAFVQNP
SGALPKAYPDNHLSQVDVNELFSKLLKTGILKLSQPDSSTTQTNEVAAQPPTEEEEDQNE
DQDVPDLTNFTIEELKQRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQNRT
EKDVSRKVTHRRWYYSLTDWIEFEEIADLEERAKSQFFEKVHEEVVLKTQEAAKEKEFQS
VPAGPAGAVESCEICQEQFEQYWDEEEEEWHLKNAIRVDGKIYHPSCYEDYQNTSSFDCT
PSPSKTPVENPLNIMLNIVKNELQEPCESPKVKEEQIDTPPACTEENIATPIEIKTENDT
VESV
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccgacgccggccgaggccggtaccgcgggggcccgggaggacgcctgtcgg
gattatcagtcatccctcgaagacctgaccttcaatagcaaaccgcacatcaatatgctg
accattctagctgaggagaacctgcccttcgccaaggagatcgtctctctcatcgaggcc
caaaccgccaaggctccttcctcagagaagcttcctgtaatgtaccttatggattctatc
gtgaaaaatgttggacgagagtatctcactgcctttactaaaaatctagttgcaacattt
atttgtgtgtttgaaaaggtggatgaaaatactagaaaaagtttatttaaattacgttcc
acatgggatgagatattcccattgaagaaactttatgccctggatgtcagagtcaattcg
ttagatcctgcttggcctattaaacctctaccccccaatgtgaatacatctagcatccat
gtgaatcctaaatttttaaataaatcgcctgaagaaccttcaacacctggcacagtggtc
agttcccctagcatctccactcctccaattgttcctgatatacaaaagaatcttactcaa
gaacaactaataaggcagcagttacttgcaaaacaaaaacaattattagaacttcagcag
aaaaagctggagcttgaactagagcaagctaaagcacaactggcagtttctcttagtgtt
cagcaggagacatccaacttaggttctggatctgcaccatccaaattacatgtttcacaa
attcctcctatgggagttaaaactccccatcagattcctttgcaacctgaaaaaagccgt
ccaggtccatccttacaaattcaggacttgaaaggaacaaaccgggatccccgtcttaat
aggttgagccagcattcttctcatggaaaagatcaaagtcacagaaaagaattcctaatg
aacacattaaaccaatctgatattaagacaagtaaaactataccttctgaaaaattaaac
tcatccaaacaagaaaaaagtaaatcaggtgaaaaaataaccaagaaagaacttgaccag
ttagattctaaatctaaatctaaatctaaatcaccatcacctttgaaaaacaaattctct
cacacaaaagacttgaaaaatcaagaatctgaatgcccaaggatgtctgacttgagtaag
agagatccaagattaaaaaaacatcttccagataagactgatagcaaagatgatgacgca
aaagagaagagaaaaacttcagaaaaaaaagataaagatgagcatatgaaatcatctgaa
catagactggctggaagtcgaaataaaatcgttaatggcattgttcaaaaacaagatgta
ataacggaagactcagaaaaacagggaacaaaaccagggagatcaagtactagaaagcga
tcaagatcgagatcacccaagtctcggtcaccaattatacattctcctaaaagaagagat
aggcggtcacccaaacgaaggcaaaggagtatgtctccaacctcgacagccaaagctgga
aagattcgccaatctggatgtaagccgtcacatatggaagactttatgccaccttccagg
gaagaaagaaatgctaagagaggtactaaacaggatgttcgagatccaaggcgaataaaa
aagactgaagaggaacgaccgcaagaaactacaagtcagcattctataaagtcaggcacg
gaaccaaaggagaacatagaaaattggtcaagttccaagtctaacaaaagatggaaatct
ggttgggaagaaaataaaagcttacaacaaagtgatgaccatagtaaatctcctcatcta
aggcatagggaaagctggtcaagcactaaaggaatcttgtcacctcgagccccaaagcaa
cagcatcgattaagtgtagatgccaatcttcaaattcctaaagagttaactcttgcaagc
aaaagagaattacttcaaaagacgagtgaacgtttagcatctggtgaaattacacaggat
gagttccttgttgttgtgcatcaaattcgacagctatttcagtatcaagaaggtaaacat
agatgcaatgtacgcgatagtccttcagaagaaaataaaggtggattaaaaaagaaacct
ctcttatctgatgctgaattaacctactatgaacataaagcaaaactgaaaaggacacag
gttcagcattcatttccaagacttgatctcttagatcctgatatttttgactaccctttg
actgatgccttgttgtctggaatagaatgtgagccatccaaaagtaaacatgcaagtagg
aatagtggagcacagtttgacagaaaagaacaatttagtgaaagagcaagacgtctttct
cctatatctgggagtcgttcttatgctgagaatctttcaccccatgagggccggagaaga
catgacgagcaagtctctgctaaaggtgtacgagaagagcagaggtcaccattcaatgat
cgttttccacttaagcgacctagatatgaagattcagataaaccatttgtagatagccca
gcatcacgatttgccggcctcgatacaaatcagcgactaacagcgttagctgaagacaga
ccattatttgatggacctagtaggccatcagtaacaagagatggcccaaccaagatgatt
tttgaaggacctaataaattaagccctagaattgatggacctcctgcaccaggttctctt
cgatttgatgggtcacctggacaaatggggggaggtggccctttgagatttgaaggacca
caaggtcagctaggaggcgggtgtcctttgagatttgaaggtcctccaggaccagtaggg
acacctctgcggtttgaggggccaattggtcaagcaggcggaggtggttttcgatttgaa
ggttcccctggtctgaggtttgagggatctgcaggtggtctacgatttgaaggaccaggc
ggccagcctgtgggtgggctcaggtttgagggacatcggggtcaacctgtgggaggtctg
aggtttgagggacctcatggtcagcctgtgggtggacttagatttgataatccccgaggt
cagcctgtaagtggacttagatttgagggaggtcatggtccatcaggagctgcaattagg
tttgatggacctcatggtcagccagcaggtgggatcagatttgagggccctttgctacag
cagggagttggaatgaggtttgagggcccccatggtcagtcagtagctggtctgaggttt
gaaggacaacatactcaactgggtgggaaccttagatttgagggtccacatggtcaacca
ggggttgggattaggtttgaggggcctttagtccaacaaggaggtggaatgaggtttgag
ggtcctgtaccaggaggtggactgagaattgaagggcctctgggtcaaggtggtccaaga
tttgaaggttgtcatgctttaaggtttgatgggcagccaggtcagccatcactcttacca
agatttgatggattacatggtcaaccaggtcctagatttgaaagaactggtcaaccaggc
ccacagagatttgatggaccacctggacagcaggttcaaccaagatttgatggtgttcct
caaagatttgatggtccacaacaccagcaagcatcaaggtttgatattccccttggtctt
caaggtgcacgatttgacaatcatccttcacaaaggcttgaatccgtttctttcaatcag
actggcccatataatgacccgcctggcaatgcttttaatgccccatcccaaggattgcaa
ttccaaagacacgaacaaatatttgattcacctcaaggaccaaattttaatggaccacat
ggccctggaaaccagagtttctcaaatcctcttagagcttctggacactattttgatgaa
aagaatcttcaaagttctcaatttggaaactttggcaatttacccgctccaataacagta
ggaaacattcaggcatctcaacaggttctgactggtgttgctcagccagtaccatttggc
cagggacaacaatttttaccagttcatccacaaaatcctggagcatttgttcaaaatcct
tcgggagcccttcctaaggcatatcctgataatcacctcagtcaggtggatgtaaatgaa
ttattttcaaaactgctaaaaacaggaattttgaaattgtctcagcctgattcatctaca
acacaaacaaatgaagttgctgctcagcctcctactgaagaggaggaagatcaaaatgaa
gatcaagatgttccagatcttaccaatttcacaattgaagaattaaaacagcgttatgat
agtgttataaatcgactgtacactggtattcagtgttactcttgtggaatgaggtttaca
acatcacagacagatgtatatgcagatcacttggactggcattatcggcaaaatagaact
gaaaaagatgttagcagaaaagtcactcatagacgttggtactacagtttaacagattgg
atagaatttgaggaaatagctgatttggaagaacgtgcaaaaagccagttttttgaaaag
gtgcatgaagaagttgtgctcaaaactcaggaagctgctaaagaaaaggagttccaaagt
gtacctgcagggccagctggagcagtggagagttgtgaaatctgtcaagaacaatttgaa
caatactgggatgaagaggaggaggagtggcatttaaagaatgccattagagtggatgga
aagatttatcatccatcatgttatgaagattaccaaaatacatcttcatttgattgtacg
ccatctcccagcaagacaccagttgaaaaccctttgaacattatgttgaacattgtcaaa
aatgaattgcaggaaccctgtgaaagtcccaaagttaaggaagaacaaattgatactcca
ccagcttgtacagaggagaacatagcaacacccattgaaattaaaacagaaaatgataca
gttgagtcagtttaa
DBGET
integrated database retrieval system
