Pipistrellus kuhlii (Kuhl's pipistrelle): 118714053
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Entry
118714053 CDS
T07682
Symbol
NRDE2
Name
(RefSeq) nuclear exosome regulator NRDE2
KO
K26109
nuclear exosome regulator NRDE2
Organism
pkl
Pipistrellus kuhlii (Kuhl's pipistrelle)
Brite
KEGG Orthology (KO) [BR:
pkl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkl03019
]
118714053 (NRDE2)
Messenger RNA biogenesis [BR:
pkl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
118714053 (NRDE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
TPR_14
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
TPR_19
Motif
Other DBs
NCBI-GeneID:
118714053
NCBI-ProteinID:
XP_036284884
LinkDB
All DBs
Position
Unknown
AA seq
1166 aa
AA seq
DB search
MALFPAFAGVSEAPDSGSARKELDWLSNPSFCVETVTSLSQQAEEAAALVSEESLLTRSP
LKSELSDESDSNRNLRQASRKKKKEKRKKRKHQHHKKTKRKRGQSSSSGSEPDTDSDKDK
SPRGLRGGNRGLETLSQDNAAAAAGPRCVWLEDIQALTGETFRTDKKPDPANWEYKSLYR
GDIARYKRKGDSCLGINPKKQCISWEGAPTEKKRAHKHVERYFTKKNVGLMSADGVAVSS
KADPPSSAAGSFIPVKDSDDVVPPVTTWLNPLGIYDQSTTHWLQGQGPTEQESKQPDSQP
DHKSSLLKARVEEFNRRVRENPRDTQLWMAFVAFQDEVMRSPGLYAIEEGEQEKRKRSLK
LILEKKLAILERAIDSNPSSVDLKLAKLKLCAEFWEPSTLVKEWQKLIFLHPNNTALWQK
YLLFCQSQFSTFSISKIHSLYGKCLSTLSAVKDGSILSHPELPGTEEAMFALFLQQCHFL
RQAGHAEKAVSLFQAMVDFTFFKPDSVKDLPARGQVEFFEPFWDSGEPRAGEKGARGWRA
WMHQQERGGWVVINPDEDDDEPEEDDQDIRDKTLPKWQIWLAAERSRDQRHWRPWRPDKT
KKQTEEDCEDPERQVLFDDIGQSLIRLSSQALQFQLIVAFLQFLGVPAGFSPPASCLYLA
MDENSVFDNVLYDEQPLTSPNLSFSGVSCVGRTDQLGCRRWTRGHSREGEEFIRNLFHLV
MPLFSGPERSQLCSSWLRYEIAKVIWCLHTKNKKRLKSRGKNCKKLAKNLLKEPENRNNV
CLWKQYAHLEWLLGNTEDARKVFDTALSSAGSRELKDPEVCELSLLYAALELELAPDTRV
ATTARAVHILTRLAESGPYGPYTGQVLAVHILKARKAYEHALQDCLGESCVSDPAAAASL
NRLVSVVKCFMLFQYLTTGIDAAVQIHEQVFAKLKGALPAEGPGLEASACPPSVSVSSVL
EAVTLMHTSLLRFHMKVSVYPLAPLRQALSEALRLYPGNQVLWRSYVQIQSKSHSANRTR
RFFDAVTRSAKPLEPWLFAIEAEKMRKRLVETVQRVDGREVYATIPETGLTHRIRALFEN
AIRSEHGSQCPLLWRMYLSFLVSLGNKDRSKGVFYKALQSCPWAKALYMDAVEYFPDEMQ
EILDLMTEKELRVRLPLEELELLLED
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgttcccggcctttgctggcgttagtgaggctcccgatagcgggagcgccagg
aaagaattagattggctgagcaacccaagcttttgtgttgaaaccgtcacatctctgagc
cagcaagctgaagaggccgcagctctagtctctgaagagtcactgctgacgaggagtcct
ctgaaatcagagctgtcagatgaaagtgactcgaacagaaacctccgacaagcaagcagg
aaaaagaagaaggagaaaaggaagaaaaggaagcatcagcaccacaagaaaaccaagaga
aaacgtgggcagtcaagtagcagtgggtctgagccagacactgactctgacaaggacaaa
tcccccagaggcctcagaggcggtaacagaggactggagacactgagccaagacaatgct
gctgctgctgctgggccccgctgtgtttggctggaggacatccaggctctgacaggagaa
acctttagaacagataagaaaccagatcctgcaaactgggagtacaagtctctctaccgg
ggagatatagcaagatacaagaggaaaggagactcctgccttggcattaaccctaagaag
cagtgcatatcctgggagggggcgcccacggaaaagaagcgggcacacaagcacgtggag
cgctatttcacgaagaagaacgttgggctgatgagcgcggacggcgttgccgttagcagt
aaagcggaccctccctcgtctgcggccggctccttcatccctgtgaaggactcggacgat
gtggttcctcctgttacaacctggttgaaccctctggggatttatgatcagtccaccacc
cattggttacaaggacaaggtcccacagagcaggaatccaagcagccggactcacagcca
gaccacaagagctcgcttctcaaggcccgggtggaggagtttaacaggagggtgcgggag
aaccctcgggacactcagctgtggatggcgttcgttgctttccaggacgaggtcatgaga
agccctggcctgtatgccatcgaggagggcgagcaggagaagcggaagcgctccctgaag
ctcatcctggagaagaagctggccatcctggagcgggccatcgacagcaaccctagcagc
gtggacctgaagcttgccaagctgaagctctgcgccgagttctgggagccctccacgctg
gtcaaagagtggcagaaactgatcttcctgcaccccaacaacacagccctttggcagaaa
tacctcttgttttgccagagccagtttagcaccttttcgatatccaaaattcacagcctt
tatggaaagtgcttgagcacactgtctgctgtgaaggatggcagcatcttatctcaccct
gagctgcctggcaccgaagaggccatgtttgcgctcttcctgcagcagtgccacttcctg
cgccaggccgggcacgccgagaaggccgtctccttgttccaggccatggtcgacttcacc
ttcttcaaacccgacagcgttaaagacctgcccgcccgcggacaggtggagttcttcgag
cccttctgggacagcggagagccccgggctggagagaagggcgcccgcggctggcgggcg
tggatgcaccagcaggagcggggtggctgggtggtcatcaacccagatgaggatgatgat
gaaccagaagaggatgaccaggacatcagagataagactctgcccaaatggcagatctgg
cttgctgctgagcgatcccgagaccagaggcactggcggccgtggcgccctgataagacc
aagaagcaaacggaggaagactgtgaggatccagagagacaggtgctgtttgatgatatc
ggacaatctctaatccgactctccagccaggctcttcagttccagctgattgtggccttc
ctgcagttcttgggcgtgcctgctggcttcagccctccagcctcctgcctctacctggcc
atggatgagaacagcgtcttcgacaacgtgctttacgacgaacagccattgacttctccc
aacctttcattttctggcgtcagctgtgtcggtcgcacggaccagttgggctgtcggcgc
tggaccaggggtcacagccgagagggcgaggagttcatccgcaacctcttccacctggtg
atgcctctgttctcaggcccggagaggtcccaactctgctcctcctggctacggtacgag
atcgcaaaggtcatttggtgcctgcacactaaaaacaagaagaggttaaaatcaagagga
aagaactgcaaaaaactagccaagaacctccttaaggagccagaaaaccgcaacaatgtt
tgcctctggaagcagtatgcacatctggaatggttgcttggcaacacagaggacgccaga
aaagtgttcgatacagcactcagctcggcagggagccgggagctgaaggacccggaggtc
tgtgagcttagtctgctctatgctgcgctggagctggagctggcgccggacaccagagtg
gccaccacggcccgagctgtccacatactcaccaggctggctgagagtggtccctacggg
ccctacactgggcaggtcctggccgttcacattctgaaagctcggaaggcttacgaacat
gcactgcaggactgtttgggtgagagctgtgtctctgatccagctgccgccgcctccctt
aaccgcctagtcagcgtggttaaatgctttatgctcttccagtatctgaccacagggatc
gatgccgctgtgcagatacacgagcaggtgtttgcaaaactgaagggcgctctccccgca
gaaggcccgggcctggaggccagtgcctgccccccgagcgtgagcgtgagcagcgtcctc
gaggcggtcacactgatgcacacgagcctgctcaggttccacatgaaagtcagcgtctac
cctctggctcccctgcggcaggcgctctcggaggctctgaggttgtatccaggcaaccag
gttctgtggcggtcctacgtccagattcagagcaagtcccacagcgccaaccggaccagg
aggttcttcgacgcagtcaccaggtctgcgaaacccttggagccttggctgtttgccatt
gaggctgagaaaatgaggaagagactggtagagaccgtccagagggtagatggcagagag
gtctacgccacgattcctgagaccggcttgacgcaccggatcagagccctgtttgagaac
gccatccggagtgagcacggcagccagtgccccttactgtggaggatgtacttgagtttt
ttggtttcgttaggaaacaaggacagaagcaagggtgtgttctacaaagcacttcagagt
tgtccttgggcaaaggccttgtacatggacgccgtggagtacttccccgacgagatgcag
gagatcctggacctgatgacggagaaggagctccgagtgcgcctgcccctggaggagctg
gagctgctgctggaggactag
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