Pipistrellus kuhlii (Kuhl's pipistrelle): 118714132
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Entry
118714132 CDS
T07682
Symbol
SCAF4
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
pkl
Pipistrellus kuhlii (Kuhl's pipistrelle)
Brite
KEGG Orthology (KO) [BR:
pkl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pkl03021
]
118714132 (SCAF4)
03041 Spliceosome [BR:
pkl03041
]
118714132 (SCAF4)
Transcription machinery [BR:
pkl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
118714132 (SCAF4)
Spliceosome [BR:
pkl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
118714132 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
ARM_ECM29_C
Motif
Other DBs
NCBI-GeneID:
118714132
NCBI-ProteinID:
XP_036284954
LinkDB
All DBs
Position
Unknown
AA seq
1124 aa
AA seq
DB search
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGSSSTVLGADSVANNEGSPPPPVKVSSEPPLVTANSVPSVQQLP
SSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPAIDNAVMAQVQAITAQLKTTPAPA
PEQKATAFDKKLLDRFDYDDEPEAVEELKKEDAAAAAAAAAAGTTSAAAAPAAVPAPPTA
AVPTASPPQAPFGYPGDGMQQPAYPPHQNMDPFQPPMMAMPQDPGHHQVQVPLPPNGQMP
AFSLLPPPAFPALAPPVLPPAAPVQQPFPAPFPAPSEPLTQKAHQEMKVEQPCIQEVKRH
MSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKE
RERRQKGLPPVRSETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAY
IVMVHRQDAHRALQKLSRGSYKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYVPWDKV
KPEELESFCEGGMLDSDTLNPEWKGITKKHENEVAQNGGAESSHAEPVSPVPKPLPVPVP
PIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRP
GFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTVAGLSEDPPKDLPIGNPIPT
VVSGARGNAESGDGAKMYGSAAPPAAPASMPTPPVTQPISLMGSQGVAPGPVVGLQAPST
GLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFGMPPPHGMKG
PFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQQQQQQQQQPPPTQPQQPPPAQQPPP
SQQQPPFRNDSRQQFDSRQQFGPGRDQERFGRRSFGNRVDSERDRYGSRGDERESSGRER
REWGRRSPERDRHRDAEDRGRRAGGHRDRERDSRDRESRREKEEARAKERAAEPPPAQAG
GTDPAPDLAKGAAEPAPAPPAEEQPAQATSPAHPEEDPAAAEAR
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgccttcaaccaggagctcttttcacttatggatatgaaacctccc
atctctcgagccaagatgattctcatcacaaaagctgctattaaagccattaagctttat
aagcatgtagttcaaatagtagaaaagttcatcaaaaagtgtaaaccagaatacaaggtt
ccagggttatatgtaatcgactcaatcgtccgacagtctcgtcatcagtttggaactgat
aaagatgtttttgggccaagattctctaaaaacataaccgccacattccagtatttatat
ctgtgtccatcggaagataagagtaaaatagttcgtgtgctgaacctttggcaaaaaaac
ggagtattcaaaatagaaattatccagccccttctggacatggccgcaggcagcagcagc
accgtgctgggcgcagacagcgtcgccaacaacgaaggttcaccgccgcctccagttaaa
gtttcttccgagccgcccctggtcactgcgaactctgtgccctccgtgcagcagctgccc
agctcggacgcttttgctgctgtggcccagctgtttcagacgacccaagggcaacagctt
cagcagatccttcagacttttcagcagcctccaaaaccacagtctcccgccattgacaat
gctgtgatggctcaggtgcaggccatcaccgctcagttaaagaccacgccggcgccggcg
ccagagcagaaggccacggcgtttgacaagaagctactcgatcgatttgattatgacgat
gagccagaagctgtggaagaattgaagaaagaagatgctgctgccgccgccgctgctgct
gccgcgggtaccacctctgctgctgccgcacctgctgctgtcccggccccgcccactgct
gccgtgcccaccgcgtctcccccacaggcgccctttgggtatcctggagatggcatgcag
cagccagcgtaccccccacatcaaaacatggacccgttccagcctccgatgatggccatg
ccacaggaccccgggcaccaccaggtccaggttccgcttcctcctaatggacagatgccg
gcgttcagccttctgcccccaccggcgttccctgcactggctccgcctgtgcttcctcca
gccgcccccgtgcagcagccgttcccggccccgttcccggcccccagcgagcccctcacc
cagaaagcacatcaggaaatgaaagtagaacagccttgtattcaagaggtgaagcggcat
atgtcggataacagaaagtcgagatctaggtcagcatccaggtcaccgaaaaggaggcgc
tccaggtctggctctagatctcggcggtctcggcatcgacgctctcgatctcggtcccgg
gacagacgccgccactctcctcgctctcggtcccaagaaagacgggaccgagagaaagag
agggagcgccggcagaagggccttcctcccgtcaggtccgagaccgcgagcgtttgtagc
actaccctctgggtgggacagctggacaaaaggacgactcagcaggacgttgccagtctc
ctagaagagtttggtccaattgaatcgattaatatgattcctcccagaggctgtgcctac
attgtcatggttcataggcaagacgcgcaccgggccctgcagaagctgagccgaggcagc
tacaaagtgaaccagaagtccataaagattgcctgggccttaaacaaaggcatcaaggcc
gactataagcagtactgggacgtggagctgggtgtgacttacgttccttgggacaaagtc
aagcctgaggagctggagagcttttgtgaaggaggcatgttggacagcgacacacttaac
ccagagtggaaaggaatcaccaagaagcacgagaacgaagttgctcagaatggaggggcg
gaaagctcccatgcagagccagtgtcgcccgtccccaagcctttgcccgtgcctgtccct
cccattcccgtccccgctccgatcacagtacctcccccacaggtccccccacatcagcca
gggcctcctgtggtcggcgcgctccagccgcctgctttcacgccgcctctgggaattccg
ccgcccggcttcggtcctggcgttcccccaccgccgccgcctccgccctttttacggcca
ggattcaaccccatgcatttaccaccaggtttccttcctcccggacccccacctcccata
acgccaccagtgtccattcctcctccgcacactccgcccatcagcatcccaaactctact
gtcgctggtctaagtgaagaccctcccaaagacttacctattggaaatcccattccaaca
gtggtgtctggggctcgaggaaacgccgagtctggtgacggcgcgaaaatgtatggctct
gccgctccgcccgccgcgcctgcgagtatgcccacccctccggtaacccagcccatctca
cttatgggttctcaaggagtggcgcccgggcctgtggttgggctgcaggccccgtccacg
ggcctcctgggggcccgccccgggctgatccccctgcagcgcccgccgggcatgcctccg
cctcacctgcagcgcttcccgctgatgccgccccggcccatgccgccccacatgatgcac
cggggcccgccgcccggccccgggggcttcgggatgcccccgccccatgggatgaaaggc
cccttcccgccccacggccccttcgtgcggcccgggggcatgccgggcctcgggggcccg
gggccgggcccggggggccccgaagacagagacgggaggcagcagcagcagcagcagcag
cagcagcagccgccgcccacgcagccccagcagccgccgcccgcccagcagccgcccccc
tcgcagcagcagccgcccttcaggaacgacagcaggcagcagttcgacagcaggcagcag
ttcgggccggggagagaccaggagaggttcgggaggcggtccttcggcaatagggtggac
agtgagcgcgaccgctacggcagccgcggcgacgagagggagagcagcggccgcgagagg
agggagtggggacggaggagccccgagcgggacagacacagagacgccgaggacaggggc
cggcgggctggcgggcaccgtgaccgcgagagagattcgagggacagggagtcccgccga
gagaaggaggaggcccgggccaaggagagggccgccgagccgcccccggcccaggcgggg
ggcacggaccccgccccggacctcgccaagggggcagccgagccggcgccggccccgcct
gccgaagagcagccggcacaggctacctcacccgcacacccggaggaggaccccgcggcg
gccgaggcccgctag
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