Pipistrellus kuhlii (Kuhl's pipistrelle): 118717341
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Entry
118717341 CDS
T07682
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
pkl
Pipistrellus kuhlii (Kuhl's pipistrelle)
Pathway
pkl01524
Platinum drug resistance
pkl03430
Mismatch repair
pkl05200
Pathways in cancer
pkl05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
pkl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
118717341 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
118717341 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
118717341 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
118717341 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkl03400
]
118717341 (MSH6)
DNA repair and recombination proteins [BR:
pkl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
118717341 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
HORMA
MUM1-like_PWWP
WPP
Motif
Other DBs
NCBI-GeneID:
118717341
NCBI-ProteinID:
XP_036291143
LinkDB
All DBs
Position
Unknown
AA seq
1359 aa
AA seq
DB search
MSRQSTLFSFFPKSPGGMNNANKAPAKASGGGDAAAAAAAAGGASPSPGEDVARSEVGPG
RSASSPEARNLNGGLRRSTTPAVSSSSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTF
IREKGKSARVHVQFFDDSPTRGWVSRRLLKPYTGSKSKEAQKGGHFYSSKPEILRAMQRA
DEALNKDKIKRLELAVCDEPSEPEEEEMEVGTTYASDKNEEDNEIESEEEVRPKVQGSRR
SSRQIKKRRVISDSESDIGGSDVEFKPDAKEEGSSDEASSGVGDSDSEGLHSFVKVAPKR
KKMMTGNGSLKRKTSRKEMPPVSKRATGISSETKNTLYAFSVPQNAEPTAHISGNDSSRP
NVWYHETLEWLKEEKRRDIHRRRPDHPDFDASTLYVPEDFLNSCTPGMKKWWQIKSQNFD
LVIFYKVGKFYELYHMDALTGVSELGLVFMKGTWAHSGFPEIAFGRYSDSLVQKGYKVAR
VEQTETPEMMEARCRKMAHISKHDRVVKREICRIITKGTQTYSVLEGDPSENYSKYLLSL
KEKEEDTSGHTRVYGVCFVDASLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFERGNLS
TETKMILKGSLSSALQEGLISGSQFWDAAKTLRTLLEEGYFKEKLNEDSGVVLPHVLKGM
TSESDSIGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDMVSATRP
CAAFSKANQRMVLDSVTLNNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPL
CNPFAINDRLDAIEDLMFVPDKISEVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRA
IMYEETTYSKKKIIDFLSALEGFKVICKIIETMEEVIDDFKSKILKQVITLQTKNPEGHF
PDLTVELNRWDTAFDHEKARKTGVITPKVGFDTDYDQALADIKENEQSLLEYLEKQRSRI
GCRTIVYWGIGRNRYQLEIPENFITHNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAE
ERRDASLKDCMQRLFYNFDKNYKNWQAAVECIAVLDVLLCLANYSRGGDGPMCRPVVLLP
KEDTPIFLDLKGSRHPCITKTFFGDDFIPNDILIGCEEKEEENGKASCVLVTGPNMGGKS
TLMRQAGLLAIVAQMGCYVPADVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASIL
THATAHSLVLVDELGRGTATFDGTAIASAVVKELAENIKCRTLFSTHYHSLVEDYSQNVA
VRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAR
EFEKTTHSLRLFREVCLASERSTIDAEAVHKLLTLIEEL
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcagagcacgctgttcagcttcttccccaagtccccgggggggatgaataat
gccaacaaggccccggccaaggcctcaggtggaggagacgccgccgccgccgccgccgcc
gccggcggggcctccccttcccccggcgaggatgtggcccggagcgaggtcgggcctggg
cgctccgcgtcgtcgcccgaggcgaggaacctcaacggagggctgcggaggtcgacgact
cctgcggtttcctccagcagttcttgtgacttctcaccaggtgatttggtttgggccaag
atggagggttatccctggtggccttgcctggtttacaaccacccttttgatggaacattc
atccgtgagaaagggaagtctgcccgagttcatgtacagttttttgatgacagcccaaca
aggggatgggttagcagaaggctattaaagccatatacaggttcaaaatcaaaggaagcc
cagaaaggaggtcatttttacagttcaaagcctgaaatactcagagcaatgcagcgtgca
gatgaagccttgaataaagataagattaagagacttgaattggcagtgtgtgatgagccc
tcagaaccagaggaggaggaaatggaggtgggtacaacttatgcatcagataagaatgaa
gaagataatgaaattgagagcgaagaggaagtgcggcctaaggtgcaaggatctaggcga
agtagccgccaaattaaaaaacggagagtcatatcagactctgagagtgacatcggtggt
tccgatgtggaattcaagccagatgccaaggaagaaggaagcagtgatgaagcaagcagt
ggagtgggggatagtgacagcgaaggcctgcatagctttgtcaaagttgctccaaagcgg
aagaaaatgatgactggaaatggctctctcaaaaggaaaacttcaaggaaggaaatgccc
cctgtcagtaaacgagcaactggcatttcctcagaaaccaagaataccttgtatgctttc
tctgtccctcaaaatgctgaacccacagcccacattagtgggaatgatagtagtcgccca
aatgtttggtatcatgaaactttagaatggcttaaagaagagaagagaagagatatacac
aggaggcgacccgatcatccagattttgatgcatctacactctacgtgcctgaggatttt
cttaattcctgtactcctgggatgaagaagtggtggcagattaagtctcagaactttgat
cttgtcatattttataaggtggggaagttttatgagctgtaccacatggatgctcttact
ggagtcagtgaactagggctggtattcatgaaaggcacctgggcccattctggtttccct
gaaattgcatttggccgatactcagattctctggttcagaagggctataaagtggcacgg
gtggaacagactgagaccccagaaatgatggaggcaagatgccgaaagatggcacacata
tctaagcatgatagagtggtgaagagggagatttgtaggatcattactaagggtacacag
acgtacagtgtgctggaaggggacccttctgagaactatagtaagtatcttcttagcctt
aaagaaaaagaggaagatacttctggccacactcgagtatatggtgtatgctttgttgat
gcctcactgggaaagtttttcataggtcagttttcagatgatcgccattgctcaaggttt
aggactctcgtggcacattatcctccggtacaagtcctgtttgagagaggaaatctctcc
acagaaaccaagatgattctgaagggttcattatcctctgctcttcaggaaggtctgata
tcaggctcccagttttgggatgcagccaaaactttgagaactcttcttgaagaaggatat
tttaaagaaaagttaaatgaggacagtggggtggtgttaccccacgtgcttaaaggtatg
acttcagagtctgattctattgggttgacaccaggagaaaaaagtgaattggccctctct
gctctaggtggttgtgtcttctacctcaaaaaatgccttattgatcaagagcttttatca
atggctaattttgaagaatatattcccttggattctgacatggtcagtgctacaagacct
tgtgctgctttttctaaagccaatcaacgaatggtgctagattctgtgacattaaacaac
ttggagatttttctgaatggaacaaatggttctaccgaaggtaccctactagagaagatt
gatacttgccatactccttttggtaagcggcttctaaagcagtggctgtgtgctccactg
tgtaacccttttgctatcaatgatcgtttagatgctattgaagacctaatgtttgtgcct
gacaaaatctctgaggttgtagatcttttaaagaagcttccagaccttgagaggttattg
agtaaaattcataatgttgggtctcccttgaagagccagaaccacccagatagcagggct
ataatgtatgaagaaactacatacagcaaaaaaaagattattgatttcctttctgctctg
gaaggattcaaagtaatatgtaaaattatagagactatggaagaagtcattgatgacttt
aagtctaaaattcttaagcaggtcattactctgcagacgaaaaatcctgaaggtcatttt
cccgatttaactgtagaactgaaccgatgggatacagcctttgaccatgaaaaggctaga
aagactggagtgattactccaaaagtaggatttgacactgattatgatcaagctcttgcc
gacataaaagaaaatgaacagagcctcttggaatacttggagaaacagcgcagtcgaatt
ggctgtagaaccatagtctattggggaattggtagaaaccgttaccagttggaaattcct
gagaatttcatcacccataatttgccagaagaatatgagttgaaatcaaccaagaagggc
tgtaaacgatactggaccaaaactattgagaagaagttggctaatctgataaatgcggaa
gaacggagagacgcatcattgaaggactgcatgcaaagactattctataactttgataaa
aattacaagaattggcaggctgctgtagaatgcatcgcagtgttggatgtcttattgtgc
ttggctaactatagtcgagggggtgatggtcctatgtgtcgtccagtagttctattacca
aaagaagacactcctatcttcttagaccttaaagggtcccgccatccctgcattacgaag
actttttttggagatgactttattcctaatgacattctaataggctgtgaggagaaagag
gaagaaaatggcaaagcttcttgtgtgcttgttactggacctaacatgggaggcaagtct
acactcatgagacaggccggcctattagctatagtcgcccagatgggctgttacgttcct
gctgacgtgtgcaggcttacaccaatcgatagagtgtttactagacttggtgcctcagac
agaataatgtcaggtgaaagtacattttttgttgaattgagtgaaactgccagtatactt
acacatgcaacagcacattctctggtactggtggatgaattaggaagaggtactgcaaca
tttgatgggacagcaatagcaagtgcagttgttaaagaacttgctgagaatataaagtgt
cgtacattgttttctacccactatcattcattagttgaagattattctcaaaacgttgca
gtgcgcttaggacacatggcatgcatggtagaaaatgaatgtgaagatcccagtcaagag
actattactttcctttataaattcattaaaggagcttgtcctaaaagctatggctttaat
gcagcaaggcttgctaatcttccagaggaagttattcaaaagggacatagaaaagcaaga
gaatttgagaagacaactcattcactaagattatttcgggaagtttgcctggctagtgaa
aggtcaactatagatgctgaagctgtccataagttgctgactttgattgaggaattatag
DBGET
integrated database retrieval system
