Pipistrellus kuhlii (Kuhl's pipistrelle): 118720862
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Entry
118720862 CDS
T07682
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
pkl
Pipistrellus kuhlii (Kuhl's pipistrelle)
Brite
KEGG Orthology (KO) [BR:
pkl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pkl03036
]
118720862 (TDRD12)
Enzymes [BR:
pkl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
118720862 (TDRD12)
Chromosome and associated proteins [BR:
pkl03036
]
Eukaryotic type
Gene silencing
piRNA pathway
118720862 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Motif
Other DBs
NCBI-GeneID:
118720862
NCBI-ProteinID:
XP_036297115
LinkDB
All DBs
Position
Unknown
AA seq
1380 aa
AA seq
DB search
MVEQPRPLRPAPPPPLDVGAGHSVVRHLPLCAPLAHHVVSGSRGAGGGRRRRGRSGSPKR
ACGVGVGGPSAGKMLEVQVLKIEDLGCFWVIIKGNSPLLDHEADYQELNSAMNDFYNSMR
QDIKIKPLMLEEGQVCVVYCQELKCWCRAVIKSIVCSADHYLAECFLVDFAKYIPVKSKN
IRVAVETFMQLPYRAKKFRLYCTKPVTLHFDFCEDSAKIVPAKKWDTAAVQYFQNILKAT
TKVEAKLCAVEDDTFEVYLYVTIKNEKVCVNDDLVAKNFACYVSPMENKNFDSLEKPRLS
IKSASFPNKLNPALSLWPMFLQGKDSQGMEKSHGLTFLAQSLQHSWPKRVVSDPGPTATI
LDKTMKCKVDSLTGSPKKISEKKQQCISLKDENKCVESSVYWPTKRGITIYADPDIQADS
ALCQKSNEKPLRLAEKKEYNEKNGCVKLLQFLNPDPLKADGISDLQQLQKLKAGAQPASA
VLQNKIEPCLSIDTAPLSADLKKALQRNKFLGPSHTESYSWPAIARGCDVVVISQCGNDP
LLYLPPVLTILQIGGCYKSLPSRNGPLAVIVCPGWKKAQFIFELLGDYGVSSRPLHPMLL
TIGLHKDEAKNMKLPRGCDVMVTTPHSLLRFLRYQSLLFLRLCHLILDEVEVLFSEANEQ
MFAILDNFKKNIEVEERESAPYQIVAVGVHWNRHIQHLIKEFMNDPYIVITAMEEAALYG
NVQQVVHLCLESEKTSTLLQTLDFIPSQAQKTLIFTCSVAETEIVCKVVESSSIFCLKMH
KEVVFNLKSVLEQWKKKLSSGSHIVLALTDDCIPLLAITDATCVIHFSFPSSPKIFGGRL
YCMSDHFQSLTEQGSIAKQGGKKTKSVLLLTERGSCHAVGVLRYLERADAKIPSELYQFT
AGVLEAKEEKKAGRPLCPYLKAFGFCKDKRICPDRHHINPEIDNPRKLSNHAIPMFGYIK
IIPFYILNATNYFGRIVDKHVDLYATLNAEMKQYFEDSSNKTAIEKVEKFGLYGLAEKTL
FHRVQVLEVSQKADTWALDTVLVKFIDEGRTGPIPRDQLLHLPENFQALPPQAMEFIVCR
VKPADNEAEWNPKVTRYIHHKVTGKLHDAKVVFALGNTIWIDPMVHVTKLLNLKTSVIDY
NVRAEILSMGMGIDNPEHIEQLKKLYEGAKIQTVEENLSQILAPLTTEDAACLQSTQQED
GASERGADSGTNLENRKHEASPGYTGDASENRAVEPLQSFHPPVQWFQKDDVVILKIRLR
NVKDYKCKYFRDRVIFSAWVGEKFYLADLELQANIIKDDCKCIIKNEEPIITLVKERRES
WCSLLRQRNPNVTFDFDHWEECEEESHFSKVVTSKNLSCKVAEVVESSDQTSEDEETESD
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atggtggagcagccccgccccctgcgtccggccccgccccctccgctggacgtgggcgcg
gggcacagcgtcgtgcgccacctgccgttgtgcgcgccgttggcgcaccacgtggtttct
gggtctcgaggcgcgggcggcgggaggcggcggcggggccggagcgggagccccaagcgc
gcctgcggcgtcggggtcggaggaccaagcgctgggaagatgctggaggtccaggtgctg
aagattgaagatctaggttgcttctgggttattataaaagggaatagtccccttttagat
catgaagctgactaccaagaactaaatagtgccatgaatgacttctataatagcatgcgt
caagatatcaaaataaaaccattaatgttggaagaagggcaggtttgtgtggtttattgt
caggaactcaagtgctggtgcagggctgtcattaagtcaattgtatgttcagcagaccat
tacctggcagaatgcttccttgtggattttgccaagtacattccagtgaaatcgaaaaac
atccgagttgcagtagaaacttttatgcagcttccctacagagcgaaaaaattcagactg
tattgcacaaaacctgttacattacactttgacttttgtgaagacagtgctaaaattgta
cccgccaagaagtgggacactgcagctgttcagtactttcagaacatcctaaaagcaact
accaaggtggaagccaaattatgtgctgtagaagatgatacttttgaggtttatctttat
gtaactataaagaatgaaaaagtttgtgttaatgatgacctggttgcaaagaacttcgct
tgttatgtatcacccatggagaataaaaactttgattctttagagaaaccaagattgagt
ataaagtcagcatcctttcccaataaactcaatccagcacttagtctttggccaatgttt
ttgcaaggaaaagattctcaaggaatggaaaagtcacatggtttaacttttctggcgcag
tctctccagcattcgtggcccaagcgtgttgtgagtgatccagggccaacagctactatc
ctggataaaactatgaaatgtaaagtggattccttgactggttcacctaaaaagatatct
gaaaagaaacaacagtgcatctctttaaaagatgaaaataagtgtgttgaatcttcagtg
tattggccaacaaaaagaggcataaccatatatgctgatccagatatacaagcagacagt
gctttatgtcagaagtcaaatgaaaaaccactcagattggctgagaagaaagagtacaat
gagaagaatggctgtgtaaaattattgcagtttctaaatcctgatcctttgaaagctgat
ggaatttctgatctgcaacagttgcagaagctgaaggcgggtgcacagccggcctctgca
gtgctccagaacaagattgaaccttgcttgtccattgacacggcgccgctctcggcagac
ctgaaaaaggctcttcaaagaaataaatttctgggacctagccacactgaatcttactcg
tggcctgccatagcacgtggctgtgatgtggttgtcatttctcagtgtggaaatgacccc
ttgctgtaccttccaccagtgcttacgattttgcaaatagggggctgctacaagtcatta
ccaagtagaaacggacctctggcagtcatcgtgtgccctgggtggaaaaaggcccagttt
atttttgagctattgggagactatggcgtgtcctccaggccacttcatcctatgttatta
acaattggactccacaaagatgaagccaaaaatatgaagcttccaagggggtgtgatgta
atggttacaacaccgcatagcctcctgagatttctcagatatcaaagcttgttatttctt
agactctgtcacctcattttggatgaggtggaagtattattctctgaagctaatgaacaa
atgtttgctatattagataactttaaaaaaaatattgaagttgaagaaagggaatctgca
ccatatcaaattgttgcagttggagttcattggaacagacatatacaacatttaatcaaa
gagttcatgaatgatccctacattgtgatcaccgccatggaagaggctgctctctacggc
aatgtccaacaggtggtacatctttgcctagaaagtgaaaaaacctctactttactccag
acccttgacttcattccaagtcaggcacaaaagaccttgatcttcacctgttctgtagct
gaaactgaaatagtgtgtaaggtggtagaaagcagttcaatattttgcttgaaaatgcat
aaagaagtggtttttaatttaaaaagtgtattagaacagtggaagaagaagttaagttct
ggctctcacattgtattagctttaactgacgactgcatcccactcttggccatcactgat
gccacgtgtgtgattcacttcagctttccttcctcaccaaaaatttttggtggacgtctg
tattgcatgtctgatcattttcagagtttaactgaacagggttctattgcaaaacaggga
ggtaaaaagaccaaatctgtcttgctgctgacggagagaggttcgtgccatgctgtgggt
gttttgcgatacttggaaagagcagatgccaagattccatcagagctgtatcagtttact
gcaggcgttctagaagccaaggaggaaaagaaagctgggaggcctctctgtccatatctt
aaggcttttggattttgcaaagacaaaaggatttgtcctgatcgacaccatattaatcca
gaaatagacaatccaagaaaattatccaaccatgctataccaatgtttggatacattaaa
ataatacccttttacattttgaatgcaacgaattactttggtcgtatagttgataaacat
gtggatctttatgcaactcttaatgctgaaatgaagcagtattttgaggattccagtaat
aaaacagccattgaaaaggtggagaaatttggattatatggattagcagagaaaacactt
tttcacagagttcaggtgttggaggtgagccaaaaagcagacacgtgggccttagacact
gtccttgtgaagtttatagatgaaggcaggactggacccatccccagagaccagctgctg
catctcccagaaaacttccaggctctgcccccccaggccatggagttcattgtttgtcga
gtgaaacccgctgacaatgaagctgaatggaacccaaaggttactaggtacattcatcat
aaagttactggaaaattgcatgatgcaaaagtggtatttgctttaggaaatacaatttgg
attgatccaatggtgcacgttacaaaacttttaaatttaaaaacttctgtcattgattac
aatgttcgagctgaaattttgtcaatgggaatgggcattgataatccagaacatatagaa
caactgaaaaaattgtacgaaggagctaaaatacaaactgttgaagaaaacctgagccaa
atactggcaccattgaccacagaagatgccgcctgtctgcagagcacacagcaagaggac
ggggcttcagagagaggtgccgactccggaacgaacttagaaaaccggaagcatgaagct
tcacctggatacactggagatgcttccgagaacagagctgtggaacctctgcaaagcttc
caccccccagttcagtggttccaaaaagatgatgtggtcatattgaagataagactaagg
aatgtaaaagattacaagtgcaaatattttagagacagagtcattttcagtgcctgggta
ggagaaaaattttacttggctgatttggagttgcaggccaacataataaaggacgattgc
aaatgcataattaaaaacgaggaacctataatcactcttgtaaaagagagaagggagtct
tggtgtagcttactcagacagaggaatcctaatgtgactttcgattttgatcattgggaa
gaatgtgaagaggagagccacttctccaaggttgtaacatctaaaaacctgtcctgcaaa
gtggcggaagtggttgagagcagtgaccagacttcggaggatgaggagactgagagtgac
tga
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