Pipistrellus kuhlii (Kuhl's pipistrelle): 118721203
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Entry
118721203 CDS
T07682
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
pkl
Pipistrellus kuhlii (Kuhl's pipistrelle)
Brite
KEGG Orthology (KO) [BR:
pkl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkl03000
]
118721203 (RC3H1)
04121 Ubiquitin system [BR:
pkl04121
]
118721203 (RC3H1)
Transcription factors [BR:
pkl03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
118721203 (RC3H1)
Ubiquitin system [BR:
pkl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118721203 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
FYVE
zf_CCCH_4
zf-CCCH_4
PaaA_PaaC
Vesi_VP2
Baculo_IE-1
zf-RING_4
zf-RING_10
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
118721203
NCBI-ProteinID:
XP_036297817
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPVTLCSGVEDTKHYDEARKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLGPRKPLSASMGQLNEVGLPSAAILPDE
GAVDLPNRKPPALPNGIVSAGNTVTQLIPRGTDPSYDSTLKPGKMDHLSSSAPGSPPDLL
ETVPKNIPHPVPPRGPSDLPPMPVTKPMQMVPRGSQLYPAQQADVYYQDPRGAAPPFEPA
PYQQGVYYTAPQCVSRFVRPPPTAPEPGPPYLDHYPPYLQDRVVNSQYGTQPQQYPPMYP
PHYDGRRIYPAQSYPREEIFRDSPIPIEIPPAAVPSYVPESRERYQQVEGYYPVAPHPTQ
IRPSYIREPPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLPPTFH
QEELLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDAVAAGSVEMMNVESKG
MRDQRLDHQRRATETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPMQAMAPQGAPTK
SVNISDYSPYGTHGGWGGSAYSPHQNIPSQGHFSERERISMSEVASHGKPLPSADREQLR
LELQQLNHQISQQTQLRGLEAVSNRLVLQREVNTLAAQSQPPPPPPKWPGMISSEQLSLE
LHQVEREIGKRTRELSLENQCSMDIKSKLNTNKQAENGQPEPQTKVPTEDLTLTFSDVPN
GSALTQENISLLSNKTSSLNLSEDPEGGGDNNDSQRSGVTPSSAP
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacagtggacggatttcctttcctgcccgatttgcactcagact
ttcgacgaaacaattcgaaagcccatcagtttgggttgtggccatactgtctgcaagatg
tgcctgaataaactccaccggaaggcttgcccatttgaccagaccactatcaatacagac
attgaactccttcccgtgaactcagcgttgcttcagctagtgggtgctcaggtccctgag
cagcagcccgttacattgtgtagtggggttgaagatacaaagcattatgacgaagccagg
aaatgtgtagaagaattagcattgtacctgaaaccactcagcagcgctagaggagtgggt
ctgaatagcactactcagagtgttctgagtcgcccaatgcaaaggaagctggtaactctg
gtccactgccaactagtggaagaagaaggccggatccgtgccatgcgagcagctcgatcg
ttaggtgaacgaacagttacagagctcattctccagcaccagaatcctcagcagctctct
tctaatctttgggcagcagtaagggctcggggctgccagttccttggaccagcaatgcag
gaggaagctctaaagttggttctcctggctttagaagatggttctgctttgtcaagaaaa
gtattggttctctttgtggtgcaaaggttagagccacggttccctcaagcctctaaaact
agcattgggcatgttgtccagctcctgtatagagcctcctgtttcaaggtcaccaaacgg
gatgaagactcctctttgatgcaactaaaagaagaattcaggacctatgaagctctgcgg
cgagagcatgactcccagatagttcagattgctatggaagcaggcttacgaatcgcacca
gaccagtggtcctctttgttgtatggagaccagtctcacaaatctcatatgcagtccatt
attgacaagttgcagactccagcctcttttgcacaaagtgtccaggaactaacaattgct
ctccagcgaactggagatccagcaaatttgaaccgactaagaccccatttggagctatta
gcaaacattgaccccagtccagatgctcctcctcctacttgggaacagctagaaaatgga
ttggttgctgtgcgtacagtggtacatgggctggttgattacatccagaaccacagcaag
aaaggagcagatcaacagcagcctccacagcatagcaaatacaagacatacatgtgtcga
gatatgaagcagagaggaggatgccctcgtggggccagctgtacatttgcacactcccag
gaggaactggaaaaatttcgtaaaatgaacaaacgcttgggtcccagaaaacccctgagt
gcctctatgggtcagcttaatgaggtgggcctgccttcagcagctatccttcctgacgaa
ggtgcggtggatttgcccaacagaaaaccccctgctctgcccaatgggattgtgtcagca
gggaacacagtaacgcagctgattccccgaggaacagaccccagctacgattctactctg
aaaccaggaaagatggatcatctgagcagcagcgcccccggatcccctcctgacctgcta
gaaactgtccccaagaatattccacatcctgtacctccaagggggccatcagacctgcct
cctatgcctgtcactaaaccaatgcagatggtgccccggggttcgcagttatatcccgcc
cagcaggcagacgtgtattaccaggatcctcgaggagccgctccgccatttgaaccagca
ccttatcagcagggtgtgtactacactgcaccacagtgtgtgtcccgctttgtccgacct
ccaccaactgctcctgagcctggtcctccctacttggatcattacccaccctaccttcaa
gatcgtgttgtaaactctcaatatggcacgcagccacaacagtacccacctatgtacccg
ccacactacgatggccgtcgaatataccctgctcagtcttatccaagagaggagattttc
cgggatagtcctatacccattgagattccacctgcagcagtaccatcctatgtaccagaa
tccagagaaagataccaacaggtggagggttactacccagtggctcctcatccaactcag
atcagaccttcgtacatcagagagcctccttatagccggcttcctcctcctccccagccc
caccctagtctagatgagctacatcgaagacgaaaggaaataatggcccaactagaggaa
aggaaggttatctctccacctccttttgcaccttcaccaacattgccgcctaccttccat
caagaggaattattggatgaagacttgaaggtagctgggaaatataagggaaatgattat
agccagtactctccctggtcatgtgacaccatcggctcctacattggaaccaaagatgca
aaacccaaagatgctgtggcagcagggagtgtggaaatgatgaacgtggagagtaaagga
atgagagaccagcggttggatcatcagagaagagcaacagaaaccagtgatgatgacctc
atcccatttggagaccgaccaacagtgtctcggtttggtgccatctctcgaacttccaaa
acaatatatcagggtgctggcccaatgcaggctatggcacctcagggagctcccacaaaa
tctgttaacatttcagattacagtccatatggaacccatggtggctggggaggctctgct
tactcacctcatcaaaacataccttctcagggacacttcagtgagagggagagaatatcc
atgtcagaagtggccagtcatggcaaaccgcttccatctgctgacagggaacagctacga
ctagaattacagcagctaaaccatcaaattagccaacagactcagctacgtggactagag
gctgttagtaacaggctggtgttgcagagggaggtgaacaccctggcagcccagtcacaa
ccaccgccaccacctccaaaatggcctggaatgatctcaagtgagcagttgagcttggaa
ctgcaccaggtggaaagggaaatcgggaagagaacccgggaactgagtttggagaaccag
tgttctatggatataaaaagcaaattgaatacaaataagcaagcagaaaatggacaacca
gaaccacaaactaaggttccaactgaggatcttacattgacattcagtgatgtaccgaat
ggatcagccttgacccaagagaatatcagcctcctatcaaacaagaccagctctctgaac
ctatcagaggaccctgagggaggaggagacaacaatgactcccagagatcaggagttaca
cccagttctgctccttaa
DBGET
integrated database retrieval system
