Pipistrellus kuhlii (Kuhl's pipistrelle): 118725793
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Entry
118725793 CDS
T07682
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
pkl
Pipistrellus kuhlii (Kuhl's pipistrelle)
Pathway
pkl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pkl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118725793 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkl03019
]
118725793 (XAB2)
03041 Spliceosome [BR:
pkl03041
]
118725793 (XAB2)
Messenger RNA biogenesis [BR:
pkl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118725793 (XAB2)
Spliceosome [BR:
pkl03041
]
Complex B
Other components
Prp19-related factors
118725793 (XAB2)
Complex C
118725793 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
HAT_PRP39_N
TPR_12
TPR_2
TPR_8
Suf
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_NPHP3
TPR_1
Motif
Other DBs
NCBI-GeneID:
118725793
NCBI-ProteinID:
XP_036305732
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MVVMARLSRQERPDLVFDEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
VDQGRITHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETTSELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARIILEK
ATKVSFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATQAVEPAQQYEMFNIYIKRAAEIYGVTHTRSIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
REMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAEHDQPPRAQSKILFVRSDASREELAELAQQANPEEIELGEDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcatggcgcgactttcgcggcaggagcggccggaccttgtctttgatgaagaa
gacctcccctatgaggaggaaatcatgcggaaccagttttctgtcaaatgctggctccgc
tacattgagttcaagcagggggccccgaagcccagactcaatcagttgtacgagcgagca
ctaaagttgctgccctgcagctacaaactctggtaccgctacctgaaggcacgcagggca
caggtgaagcatcgctgtgtgactgatcctgcctatgaagatgtcaacaactgccacgag
agggcctttgttttcatgcacaagatgccacgtctgtggctagattattgtcagttcttg
gtggaccaaggccgcatcactcacacgcgccgcactttcgaccgcgccctccgggcgctg
cccatcacacagcactctcgcatttggcctctgtacttgcgcttcctgcgctcacaccca
ctacccgagacagccgtgcggggctaccggcgcttcctcaagctgagccctgagagcgca
gaggaatacatcgagtacctcaagtcaagcgaccggctggatgaggctgcccagcgcctg
gccaccgtggtgaatgatgagcgcttcgtctccaaggccggcaagtccaactaccagctg
tggcacgagctctgtgacctcatctcccagaacccggacaaggtgcagtcgctcaacgtg
gacgccatcatccgagggggccttacccgcttcacagaccagctgggcaagctctggtgt
tccctggctgactactacatccgcagcggccatttcgagaaggctcgggacgtgtacgag
gaggccatccggaccgtgatgacggtgcgggacttcacgcaggtgtttgacagctacgcc
cagttcgaggagagcatgattgccgcgaagatggagaccacctcggagctggggcgggaa
gaagaggatgacgtggacttggagctgcgcctggcccgctttgagcagctgatcagccgg
cggcccctgctcctcaacagcgtcttgctgcgccagaacccgcaccacgtccatgagtgg
cacaagcgtgtggccctgcaccagggccgcccccgggagatcatcaacacgtacacggag
gctgtgcagacagtggaccccttcaaggctaccggcaagccccatacgctgtgggttgca
tttgccaagttttacgaggacaatgggcagctggatgatgcccgcatcatcctggagaag
gccaccaaggtgagcttcaagcaagtggatgacctggcaagtgtgtggtgcgagtgtggt
gagctggagctccggcacgagaattacgaccaggccttgcggctgctgcggaaggcaaca
gcactgcccgcccgccgggctgagtattttgatggctcggagcctgtgcagaaccgtgtg
tacaaatcattgaaggtgtggtccatgcttgccgacttggaggaaagccttggcaccttt
cagtctaccaaggccgtgtatgaccgtattctggacctgcgcatcgccaccccccagatc
gtcatcaactacgccatgttcctggaggagcacaagtacttcgaggagagcttcaaggcg
tacgagcgtggcatctcgctgttcaagtggcccaatgtgtctgacatctggagcacctat
ctgaccaaattcatcgcccgctatgggggccgcaagctggagcgggctcgggatctcttt
gagcaggcgctggatggctgcccccccaaatacgcaaagaccctgtacctgctgtacgca
cagctggaggaggagtggggcctggcccggcacgcgatggccgtgtacgagcgcgccacc
caggccgtggagcccgcccaacagtacgagatgttcaacatctacatcaagcgggcagcg
gagatctatggagtcacccacacccgtagcatctaccagaaggccattgaggtgctgtcg
gacgagcacgcccgggagatgtgcctgcggtttgcggacatggagtgcaagcttggagag
attgaccgtgcccgcgccatctacagcttctgctcccagatctgtgaccctcggacaact
ggggccttctggcaaacatggaaggacttcgaggtacggcatggcaacgaggacaccatc
cgggagatgctgcgtatccgccgaagtgtgcaggccacttacaacacccaggtcaacttc
atggcctcacagatgctcaaggtgtcgggcagcgctacaggcactgtctccgaccttgcc
cccgggcagagtggcatggatgacatgaagctactagagcagcgggcagagcagctggca
gccgaggccgagcacgaccagcctccacgggcccagagcaagatcctgtttgtgaggagc
gacgcgtcccgggaggaactggctgagctagcgcagcaggccaaccccgaggagatcgag
ctgggggaggacgaggacgaggatgagatggacctggagcccaatgaggtgcggctggag
cagcagagtgtgccggctgccgtgtttgggagcctgaaggaagactga
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