Pipistrellus kuhlii (Kuhl's pipistrelle): 118727216
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Entry
118727216 CDS
T07682
Symbol
COL11A1
Name
(RefSeq) collagen alpha-1(XI) chain isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
pkl
Pipistrellus kuhlii (Kuhl's pipistrelle)
Pathway
pkl04820
Cytoskeleton in muscle cells
pkl04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pkl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118727216 (COL11A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
118727216 (COL11A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pkl00536
]
118727216 (COL11A1)
Glycosaminoglycan binding proteins [BR:
pkl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118727216 (COL11A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
118727216
NCBI-ProteinID:
XP_036308676
LinkDB
All DBs
Position
Unknown
AA seq
1807 aa
AA seq
DB search
MERWPSRWKTRRWPWDLAVTTLALTFLAQPREVRGAAPVDVLKALDFHNSPEGISKTTGF
CTNRKNSKGSDTAYRVSKQAQLSAPTKQLFSGGTFPEDFSILFTVKPKKGIQSFLLSIYN
EHGIQQIGVEVGRSPVFLFEDHLGKPAPEDYPLFRTVNIADGKWHRVAISVEKKTVTMIV
DCKKKATKPLGRSERAIVDTNGITVFGTRILDEEVFEGDIQQLLIVSDPKAAYDYCEHYS
PDCDSSVPKAAQAQEPQIDEYAPEDVMEYDYEYGEADYKEADSVTETPTVAEETIAQTEA
NIVEDFQEYNYGTMGSYQTEAPRRASGANEPSPTEDVFTEEYLTGEDYEAQRKNPEDTLY
ENKEIDGRDSDLPVDGDLGEYDFYEYKEYEDKQTSPTNEEFGPGVPAETDITETSINGHG
GYGEKGQKGEPAVVEPGMLIEGPPGPAGPAGLMGPPGLQGPSGPPGDPGDRGPPGRPGLP
GADGLPGPPGTMLMLPFRYGGGDGSKGPVVSAQEAQAQAILQQARIALRGPPGPMGLTGR
PGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGSKGD
RGFDGLPGLPGDKGHRGERGPQGPPGSPGEDGMRGEDGEIGPRGLPGEAGPRGLLGPRGT
PGPTGQPGIAGIDGPQGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGK
PGLAGLPGADGPPGHPGKEGQSGDKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGE
KGEDGFPGFKGDMGLKGDRGEVGQLGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGV
PGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGK
PGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGK
TGPPGPGGVVGPQGPTGETGPLGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGVSGK
DGPAGLRGFPGERGLPGAQGTPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGP
QGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGS
KGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGL
QGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSIGSVGGVGDKGEPGE
AGNPGPPGEAGTGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGP
PGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGA
KGEAGAEGPAGKTGPVGPQGPSGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPLGPPGL
PGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPIGP
PGPPGLPGPQGPKGNKGSTGPAGQKGDGGLPGPPGPPGPPGEVIQPLPILSPKKTRRHTE
GMQADAQDAMLDYSDGMEEIFGSLNSLKQDIEHMKFPMGTQTNPGRTCKDLQLSHPDFPD
GEYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDRKSEGVRISSWPKEKPGSWFSEFKRGK
LLSYLDVEGNAINMVQMTFLRLLTASARQNFTYHCHQSAAWYDVATGGYGKALRFLGSND
EEMSHDNSPYIRALHDGCASRKGYEKTVIEINTPRIDQVPIVDVMINDFGDQNQKFGFEV
GPVCFLG
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atggagcggtggccctcccgctggaagacgagacggtggccctgggacctggccgtcacc
accctggcgctgaccttcctcgcccagccccgggaggtcagaggagctgctccagttgat
gtactaaaagctctagattttcacaattctccagagggaatatcaaaaacaacaggcttt
tgcacaaacagaaagaattcgaaagggtcggatactgcttacagagtttcaaagcaagct
cagctcagcgccccgacaaaacagctcttttcaggaggaactttcccagaagacttttca
atattatttacagtaaaacccaaaaaaggcattcagtctttcctcttatccatctacaat
gagcatggcattcagcagatcggtgttgaggtcgggaggtcgcccgtcttcctgtttgaa
gaccacctggggaagcctgcccccgaggactaccccctgttccgcacggtcaacatcgcc
gatgggaagtggcatcgggtagccatcagcgtggagaagaaaacggtgaccatgatcgtg
gactgcaagaagaaggccaccaagccgctggggaggagcgagcgcgccatcgtggacacc
aacgggatcacagtgttcggcacgcggatcctggatgaagaagtgtttgagggggacatc
caacagctactgatcgtcagtgaccccaaagctgcctatgactactgcgagcattacagc
ccggactgcgattcctcggtgcccaaggccgcgcaggctcaggagccgcagatcgatgag
tatgcgcccgaggatgtaatggagtatgactatgagtatggggaagcagactataaagag
gctgacagtgtgacagagacccccactgtagccgaggagaccatagcacaaaccgaggca
aacatcgtggaagatttccaagaatacaactacgggaccatggggagctaccagaccgag
gccccgaggcgggcctccggcgccaacgagcccagtcccacggaagatgtgtttacggaa
gaatatctaaccggagaggattatgaggcccagaggaaaaaccccgaggatacactgtat
gagaacaaagaaatagacggcagggactctgaccttccggtagatggagatttaggcgaa
tatgatttttatgaatataaagaatatgaagataagcaaacgagccccactaatgaagag
tttggcccaggggtcccagcagaaacagatatcacagaaaccagtataaatggccatggc
ggatacggggaaaagggacagaaaggagagccagcagtggttgaacctggaatgctgatc
gaaggaccaccagggccagccggacctgcgggtcttatgggccctcccggtctacaaggc
ccgtctggaccccctggcgaccctggcgataggggtccccctggacgtcctggcttacca
ggggctgatggcctacccggtcctccaggtaccatgttgatgttaccgtttcgctatggt
ggcggcgatggatccaaaggcccagtggtgtctgctcaggaagcgcaggcccaggccatc
cttcagcaggctcggattgcgctgaggggtccccctggcccaatgggtctgaccggaaga
ccaggtcctgtgggggggcctggttcgtcgggggccaaaggtgagagtggtgacccaggt
cctcagggtcctcgcggtgtccaagggccacctggtcccacggggaaacctggcaaaagg
ggtcgtccaggtgctgatggaggaagaggcatgccaggagaacctgggtcgaagggagat
cgaggctttgatggacttccaggtctacccggtgataaaggtcacaggggtgaacgcggt
ccccaaggccctcccggctctcctggtgaagacggaatgaggggggaagatggagaaatt
ggaccccggggccttccaggggaagctggcccacggggcttgctggggccgcgggggacg
ccaggacccaccgggcagcctggcatcgcggggatagatggcccccaaggacccaaaggc
aacatgggtccccagggggagcccgggcctccgggtcagcaggggaaccccgggccgcag
ggtctcccaggcccgcaaggccccatcggcccccccggtgaaaagggacctcaaggcaaa
cccgggctcgcgggcctccccggtgccgacgggcctcctggtcatcctgggaaagaaggc
cagtctggagataagggtgctctgggtccgcctggcccccagggtcctattggctatccc
ggccccagaggagtgaagggagcagatggggtccgaggtctcaagggttctaaaggtgaa
aagggtgaagatggtttcccaggattcaaaggggacatgggtcttaaaggggacagagga
gaagtcggtcaattaggtcccagaggagaagatggccctgaaggtcctaaaggtcgagca
ggtcccacgggggaccctggtccttctggtcaagccggagagaaggggaaacttggtgtt
ccaggattgcctgggtatccaggaagacaaggtccaaagggttccaccggatttcccggc
ttcccaggggccaacggagagaaaggcgcacggggcgtcgcgggcaagccgggccctcgc
gggcagcgcggtcccacgggtcctcgagggtccagaggagcgcgcggccccaccgggaag
ccaggcccgaagggcacttcgggcggcgatggccccccaggccctcctggagagagaggc
ccgcaaggacctcagggtccggttggattcccaggaccgaaaggccctcctggaccacct
gggaaggatggcctgccagggcaccctgggcaacgtggagagactggatttcaaggcaag
actggtcctcctgggcccgggggtgttgttggaccacaggggcccactggcgagaccggt
cccctgggcgaacgcgggcatcctggccctccggggccacctggtgagcaaggccttcct
ggcgcggcgggaaaagaaggcgcaaagggcgacccaggtcctcaaggcgtctcggggaaa
gacggcccggcaggtctccgtggtttcccaggcgaacgaggtctccctggagctcagggt
acacctggcctgaaaggaggagagggtccccagggcccaccaggtccagtgggctccccc
ggggagcgggggtcggcgggcaccgcgggccccatcggattgccagggcgtcccggaccc
cagggcccccccgggccagccggagagaaaggtgctcctggagagaaagggccccaaggc
cccgccggcagggacggagttcaaggccccgtggggctcccggggccggctgggcccgcc
ggctcccccggggaagacggagacaagggtgaaattggtgaacccggacaaaaaggcagc
aagggtgacaaaggagaaaatggtcctcctggccccccaggtcttcagggtcctgtcggc
gcccctggaattgcgggaggtgacggggagccagggcccagaggccagcaggggatgttt
ggacagaaaggggatgagggagcaagaggtttcccgggaccccctggtcccatcggtctt
cagggtctgccaggcccacctggcgaaaaaggtgaaaatggagatgtcggtcccatgggt
ccacccggtcctccaggcccaagaggtccccaaggtcccaacggagctgatggaccacaa
ggacctccgggatccattggttccgtgggtggtgtcggagacaagggtgaacctggagaa
gcaggaaacccagggccgcccggggaagcaggcacagggggccccaaaggagaacgagga
gagaaaggggaagcggggcctcccggcgcggctggacctcctggcgccaaggggccacca
ggggacgatggccccaagggcaacccgggtcctgtcggttttcctggagaccccggtcct
cccggggagcccggccctgcgggtcaagatggcgtcggcggtgacaagggtgaggacgga
gaccccggtcagccgggtccccctggcccctccggtgaggcaggcccgccaggtcctcca
gggaagagaggtcctccgggagctgcaggtgcagagggacggcaaggggaaaagggcgcc
aagggggaagcaggggccgaaggtccagccgggaaaactggcccagtgggtcctcagggc
ccttccgggaagccaggtccagagggcctccggggcatcccagggcccgtgggagaacaa
ggtctccccggagctgcaggccaagacgggccgcccggtcccttgggaccccccggatta
cctggtctcaaaggtgaccctggctccaagggcgagaaggggcatcctggtttgattggt
ctgatcgggcctccaggagaacaaggcgagaagggtgacagagggctgcccgggacccag
ggatctccaggagcgaagggcgatgggggaattccaggccctgccggtcccatcgggccc
cccggtcccccaggcttaccgggccctcaaggtcccaaggggaacaaaggctccacgggc
cccgctggccagaaaggtgacggcggcctgccagggccccccggccctccgggccccccc
ggcgaggtcatccagcctctgcccatcctgtcccccaagaagacgaggcggcacacggag
ggcatgcaggccgacgcgcaggatgccatgctcgactactcggacgggatggaggagatc
ttcggttccctcaactccctgaaacaggacatcgagcacatgaagttccccatgggcacg
cagaccaaccccggccgcacatgcaaggacctgcagctcagccaccccgacttccccgac
ggtgagtattggatcgatccgaaccaaggctgctcaggagattccttcaaggtttactgc
aacttcacgtcgggcggcgagacgtgcatttacccagacaggaagtccgagggggtgcgg
atctcatcgtggccgaaggagaagccagggagctggttcagcgagtttaagagaggaaag
ctgctttcctatctggacgtggaaggcaacgccatcaacatggtgcagatgaccttcctc
aggctactgacggcgtccgcgcggcagaacttcacctaccactgccaccagtctgccgcc
tggtacgacgtggccaccggaggctacggcaaagcgctccggttcctgggctccaacgat
gaggagatgtcgcacgacaacagcccgtacatcagggcgctgcacgacggctgtgcgtcc
agaaaaggctacgaaaagactgtgattgaaatcaatacaccgagaattgaccaagtccct
atcgttgatgtaatgattaatgactttggtgatcagaaccagaagtttggattcgaagtt
ggccctgtctgctttcttggctga
DBGET
integrated database retrieval system
