Pipistrellus kuhlii (Kuhl's pipistrelle): 118729442
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Entry
118729442 CDS
T07682
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain isoform X1
KO
K19719
collagen type II alpha
Organism
pkl
Pipistrellus kuhlii (Kuhl's pipistrelle)
Pathway
pkl04151
PI3K-Akt signaling pathway
pkl04510
Focal adhesion
pkl04512
ECM-receptor interaction
pkl04518
Integrin signaling
pkl04974
Protein digestion and absorption
pkl05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
pkl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
118729442 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118729442 (COL2A1)
04518 Integrin signaling
118729442 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118729442 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
118729442 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
118729442 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pkl00536
]
118729442 (COL2A1)
Glycosaminoglycan binding proteins [BR:
pkl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118729442 (COL2A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
118729442
NCBI-ProteinID:
XP_036312863
LinkDB
All DBs
Position
Unknown
AA seq
1487 aa
AA seq
DB search
MLRLGAPQTLVLLTLLAAAVLRCHGQNVQKAGSCVQDGQRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDMKDCLSPETPFGECCPICSTDLATASGHPGPKGQKGEPGDIKDIVGPKG
PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA
AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG
PRGPPGPPGKPGDDGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAVGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQG
APGPAGEEGKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG
PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPSGERGEQGAPG
PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRG
LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGISGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPSGTAGARGAPGERGETGPPGPAGFAGPPG
ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG
AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGAPGEKGEPG
DDGPSGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGPLGAPGAPGPPGSPGPAG
PTGKQGDRGEAGAQGPMGPAGPAGARGIPGPQGPRGDKGETGEAGERGLKGHRGFTGLQG
LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGSNGIPGPIGPPGPRGRSGETGPAG
PPGNPGPPGPPGPPGPGIDMSAFAGLGGREKGPDPMQYMRADQAAGNLRQHDAEVDATLK
SLNNQIESIRSPEGSRKNPARTCRDLQLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPANVPKKNWWSSKSKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRL
LSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTK
HTGKWGKTMIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgctccgcctcggggctccccagacgctggtgctgctgacgctgctcgccgccgcggtc
ctccggtgtcacggccagaatgtccagaaggctggcagctgcgtgcaggacgggcagagg
tataatgataaggatgtgtggaagcccgagccctgccggatctgtgtctgtgacactggg
accgtcctctgcgacgacataatctgtgaagacatgaaagactgcctcagccccgagacc
cccttcggagagtgctgccccatctgctcaactgacctcgccactgccagtgggcaccca
ggaccaaagggacagaaaggagaacctggagacatcaaggatattgtaggacccaaagga
ccccctgggcctcagggacctgccggtgaacaaggacccagaggtgatcgtggtgacaaa
ggtgaaaaaggtgcccctggacctcgcggcagagatggagagcctgggacccctggaaat
cctggcccccctggccctcctggccccccgggtcccccgggccttggtggaaactttgcc
gcccagatggctggaggattcgatgagaaggctggtggtgcgcagatgggagtaatgcaa
ggaccaatgggccccatgggacctcgaggacctccaggccccgctggtgcccctggacct
caaggatttcaaggcaaccctggtgaacccggggaacctggtgtctctggtcccatgggt
ccccgtggtcctccaggcccccctggaaagcctggtgacgatggtgaagctggaaagcct
ggaaaatctggcgaacgaggccctcccggccctcagggtgctcgcggcttcccaggaacc
ccaggacttcctggtgtcaaaggtcacagaggctaccccggcctggacggtgctaagggc
gaagctggcgctccgggtgtgaagggcgagagtggctcccctggcgagaatggctctccg
ggccccatgggtccccgtggcctgcctggcgagagaggacggactggccctgcaggcgcc
gtgggtgcccggggcaacgacggtcagccgggcccggcagggcctccgggtcccgtgggt
cctgcaggcggtcctggcttccctggagctcccggtgccaagggtgaagctggtcccact
ggtgctcgtggtcccgaaggcgctcaaggtcctcgcggtgaacctggcactcccgggtcc
cccgggccggccggcgcctccggcaaccccggaaccgatggaatccctggagccaaagga
tctgctggtgctcctggcattgctggtgctcccggcttccctgggccccggggtcccccc
ggccctcaaggggcaactggtcctttgggcccgaaaggtcagacgggcgagcctggaatt
gctggcttcaaaggcgaacaaggccccaagggagaaactggccctgcaggcccccaggga
gcccctgggcctgctggggaagaaggcaaaaggggtgcccgcggagagcctggcggtgct
gggcccatcggcccccccggagaacgaggtgctcctggcaaccgaggttttcctggtcaa
gacggtctggccggtcccaagggagcccctggagagcgagggcccagcggcctcgctgga
cccaagggagccaacggggaccccggccgtcccggagagcccggccttcccggggctcgg
ggcctcactggccgccccggcgatgccggtcctcaaggcaaagttggaccttcgggagcc
cccggcgaagacggccgccctgggcctccgggtcctcagggggctcgtgggcagcctggt
gtcatgggcttccctggccccaaaggtgccaacggcgagcctgggaaagctggtgagaaa
ggactgcccggtgctcctggcctgagaggtcttcctggcaaggatggtgagacaggtgct
gcaggcccccctggacccgctggaccttccggggaacgaggcgagcagggtgctccggga
ccgtctggcttccagggacttcctggtcctcccggtccccccggcgaaggtggaaaacca
ggtgaccagggcgttcctggcgaagctggagcccccggcctcgtgggccccagaggcgaa
cgcggcttcccaggcgaacgtggctctcccggcgcccagggcctccagggtccccgtggc
ctccccggcactcccggcacggacggtcccaaaggagcatctggcccggctggcccccct
ggggctcagggccctccaggtctgcagggcatgcccggtgagaggggagcagccggtatt
tctgggcctaagggagacaggggtgatgtcggcgagaaaggcccagagggagcccctggg
aaggacggtggacgaggtctgacaggccccatcggcccccctggcccggctggtgccaac
ggtgagaagggagaagttggcccccctggtccttcgggaaccgctggtgctcgaggtgcc
ccgggtgaacgtggagagaccggaccccccggacccgctggattcgccggtcctcctggt
gctgacggccagcccggcgccaagggcgagcagggagaggccggccagaaaggcgacgct
ggtgcccccgggccccagggcccctccggagctcccgggcctcagggcccgactggtgtg
accggccccaaaggagcccgaggtgctcaaggccccccgggagccaccggattccccgga
gctgctggccgcgtcggacccccaggctccaacggcaaccctggcccccctggtcctccc
ggtccttctggaaaagatggtcccaaaggtgctcgaggagacagcggcccccccggccga
gccggtgaccccggcctccaaggtcctgccggagctcctggcgagaagggagagcccgga
gatgacggtccctctggtcccgatggtcctccaggcccccagggtctggctggtcagagg
ggcatcgtgggtcttcccggacagcgtggtgagagagggttccccggcctgcccggcccg
tcgggcgagcctggcaagcagggagctcctggtgcatctggagaccgaggcccccctggc
cctgtgggtccccctggcctgaccggtcctgctggcgaacccggacgagagggaagccct
ggcgccgacggcccccctggcagagacggtgcagctggagtgaagggcgatcgtggtgag
actggccccctgggtgctccgggagcccccgggccccctggctctcctggccccgccggc
ccaactggcaagcagggagaccgaggagaggcgggcgcacaaggccccatgggccccgca
ggaccagctggagcccgaggaatcccaggccctcaaggcccccgaggtgacaaaggagag
actggagaggctggcgagaggggcctgaaggggcaccgcggcttcaccggcctgcagggt
cttcccggccctcctggtccttctggagaccaaggcgcttctggtcctgctggtccttct
ggccctagaggtcctcctggccccgtcggtccctctggcaaagatggctctaacggcatc
cctggccccattgggcctcccggtccccgtggacgttctggcgaaacaggccccgctggt
ccccccgggaatcctggaccccctggccctccaggtccccctggccctggcattgacatg
tcagccttcgccggcttaggcgggagagagaaaggccccgaccccatgcagtacatgcgg
gccgaccaggcagccggcaacctgcggcagcacgacgcggaggtggacgccacgctcaag
tccctcaacaaccagatcgagagcatccgcagccccgagggctcccgcaagaaccccgct
cgcacctgccgggacctgcaactctgccatccggaatggaagagcggagactactggatc
gaccccaaccagggctgcacgttggacgccatgaaggttttctgcaacatggagacgggc
gagacctgtgtctaccccaacccagccaatgttcccaagaagaactggtggagcagcaag
agcaaagacaagaaacatatctggtttggagaaaccatcaacggtggcttccacttcagc
tacggcgatgacaacctggctcccaacactgccaacgttcagatgaccttcctgcgcctg
ctgtccactgaaggctcccagaacatcacgtaccactgcaagaacagcatcgcctacctg
gacgaggcagctggcaacctcaagaaggccctgctcatccagggttccaacgatgtggag
atccgggctgagggcaacagcaggttcacgtacacggtcctgaaggatggctgcacgaaa
cacaccggtaagtggggcaagactatgatcgagtaccggtcacagaagacctcgcgcctg
cccatcattgacattgcacccatggacataggagggcccgagcaggaattcggtgtggac
atagggcctgtctgcttcttgtaa
DBGET
integrated database retrieval system
